Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31300

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,394,109	+				+1.1
2,394,109	+				+0.4
2,394,109	+				-1.9
2,394,110	-				+0.5
2,394,110	-				+1.3
2,394,110	-				-0.5
2,394,120	+				+0.1
2,394,121	-				+0.2
2,394,129	+				-2.1
2,394,129	+				+1.4
2,394,129	+				+0.5
2,394,141	-				-1.3
2,394,141	-				-0.2
2,394,178	+				+1.3
2,394,178	+				-0.6
2,394,258	+				+1.1
2,394,326	+		RR42_RS31295	0.14	-1.8
2,394,370	+		RR42_RS31295	0.21	-0.9
2,394,508	+		RR42_RS31295	0.44	-0.4
2,394,508	+		RR42_RS31295	0.44	+0.8
2,394,508	+		RR42_RS31295	0.44	+0.2
2,394,508	+		RR42_RS31295	0.44	+0.2
2,394,508	+		RR42_RS31295	0.44	+0.2
2,394,574	+		RR42_RS31295	0.55	-0.2
2,394,751	+		RR42_RS31295	0.84	+0.3
2,394,751	+		RR42_RS31295	0.84	-0.8
2,394,752	-		RR42_RS31295	0.84	-0.6
2,394,759	-		RR42_RS31295	0.85	-0.8
2,394,759	-		RR42_RS31295	0.85	+0.5
2,394,759	-		RR42_RS31295	0.85	+3.1
2,394,759	-		RR42_RS31295	0.85	-1.1
2,394,759	-		RR42_RS31295	0.85	+0.7
2,394,848	-				-0.7
2,394,848	-				-0.0
2,394,977	+				+0.8
2,395,054	-				-0.5
2,395,103	-				-0.7
2,395,537	+		RR42_RS31300	0.48	+0.2
2,395,537	+		RR42_RS31300	0.48	+0.5
2,395,538	-				+0.1
2,395,606	+		RR42_RS31300	0.55	-0.4
2,395,682	-		RR42_RS31300	0.64	+0.6
2,396,168	+				+1.0
2,396,169	-				-0.5
2,396,169	-				-0.5
2,396,338	+		RR42_RS31305	0.16	+0.2
2,396,522	+		RR42_RS31305	0.34	+0.2
2,396,523	-		RR42_RS31305	0.34	-1.1
2,396,536	+		RR42_RS31305	0.35	+0.5
2,396,536	+		RR42_RS31305	0.35	+0.0
2,396,536	+		RR42_RS31305	0.35	+1.7
2,396,537	-		RR42_RS31305	0.35	+0.1
2,396,537	-		RR42_RS31305	0.35	-0.5
2,396,537	-		RR42_RS31305	0.35	+2.1
2,396,804	+		RR42_RS31305	0.62	-0.5
2,396,804	+		RR42_RS31305	0.62	+2.1
2,396,805	-		RR42_RS31305	0.62	+0.7
2,396,808	-		RR42_RS31305	0.62	+1.5
2,396,859	-		RR42_RS31305	0.67	+1.6
2,396,859	-		RR42_RS31305	0.67	-1.9
2,396,929	+		RR42_RS31305	0.74	+1.8
2,396,929	+		RR42_RS31305	0.74	-0.3
2,396,929	+		RR42_RS31305	0.74	+0.9
2,396,930	-		RR42_RS31305	0.74	-0.6
2,396,930	-		RR42_RS31305	0.74	+2.3