Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30765
Experiment: R2A with Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,281,224 | + | -0.5 | |||
2,281,258 | + | +1.2 | |||
2,281,288 | - | +1.4 | |||
2,281,379 | + | -0.2 | |||
2,281,379 | + | +0.1 | |||
2,281,379 | + | -0.6 | |||
2,281,380 | - | +0.6 | |||
2,281,380 | - | +1.0 | |||
2,281,420 | - | -0.1 | |||
2,281,599 | + | RR42_RS30765 | 0.65 | +0.7 | |
2,281,701 | - | -1.0 | |||
2,281,904 | + | RR42_RS30770 | 0.26 | -0.1 | |
2,281,905 | - | RR42_RS30770 | 0.26 | -0.2 | |
2,281,905 | - | RR42_RS30770 | 0.26 | -0.0 | |
2,282,056 | + | RR42_RS30770 | 0.46 | +0.8 | |
2,282,056 | + | RR42_RS30770 | 0.46 | -0.2 | |
2,282,083 | + | RR42_RS30770 | 0.49 | -1.0 | |
2,282,083 | + | RR42_RS30770 | 0.49 | -0.2 | |
2,282,084 | - | RR42_RS30770 | 0.49 | -1.5 | |
2,282,247 | + | RR42_RS30770 | 0.70 | +1.0 | |
2,282,248 | - | RR42_RS30770 | 0.70 | +0.5 | |
2,282,280 | + | RR42_RS30770 | 0.74 | -1.2 | |
2,282,280 | + | RR42_RS30770 | 0.74 | +0.1 | |
2,282,281 | - | RR42_RS30770 | 0.75 | +0.2 | |
2,282,281 | - | RR42_RS30770 | 0.75 | -1.0 |
Or see this region's nucleotide sequence