Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30600

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,241,357	+				+0.5
2,241,408	+				+0.3
2,241,430	-				-0.3
2,241,476	+				-2.2
2,241,476	+				-0.1
2,241,476	+				-0.6
2,241,476	+				-0.7
2,241,476	+				-1.0
2,241,477	-				+0.6
2,241,477	-				-0.2
2,241,477	-				-1.0
2,241,477	-				-1.7
2,241,477	-				+0.2
2,241,497	+				+0.5
2,241,497	+				-0.1
2,241,498	-				+1.3
2,241,501	+				+0.5
2,241,546	-				-0.9
2,241,621	-		RR42_RS30595	0.12	+0.6
2,241,748	-		RR42_RS30595	0.33	+0.0
2,241,786	+		RR42_RS30595	0.40	+0.9
2,241,787	-		RR42_RS30595	0.40	+0.6
2,241,874	-		RR42_RS30595	0.55	+0.3
2,241,874	-		RR42_RS30595	0.55	-0.5
2,242,042	-		RR42_RS30595	0.83	+0.3
2,242,042	-		RR42_RS30595	0.83	-0.1
2,242,042	-		RR42_RS30595	0.83	+0.9
2,242,080	+		RR42_RS30595	0.90	-0.4
2,242,081	-				-1.2
2,242,081	-				-0.3
2,242,311	-				+0.7
2,242,311	-				+0.1
2,242,418	+				+0.9
2,242,419	-				-0.1
2,242,419	-				-1.8
2,242,419	-				-2.0
2,242,820	+		RR42_RS30600	0.33	-1.3
2,242,982	+		RR42_RS30600	0.43	-0.1
2,242,982	+		RR42_RS30600	0.43	+0.5
2,242,982	+		RR42_RS30600	0.43	-0.1
2,242,982	+		RR42_RS30600	0.43	+2.9
2,243,178	-		RR42_RS30600	0.55	+0.3
2,243,246	+		RR42_RS30600	0.59	-0.6
2,243,247	-		RR42_RS30600	0.59	-0.7
2,243,247	-		RR42_RS30600	0.59	+1.9
2,243,670	-		RR42_RS30600	0.85	-0.4
2,243,670	-		RR42_RS30600	0.85	+0.2
2,243,670	-		RR42_RS30600	0.85	+1.9
2,243,846	+				-0.6
2,243,847	-				+0.5
2,244,004	+				+0.2
2,244,005	-				-0.2
2,244,187	-				-0.2
2,244,190	+				-0.9
2,244,190	+				+0.7
2,244,190	+				-2.0
2,244,190	+				+0.9
2,244,190	+				-0.0
2,244,190	+				+0.3
2,244,190	+				+0.1
2,244,190	+				+0.7
2,244,191	-				-1.4
2,244,191	-				+2.9
2,244,191	-				-1.5
2,244,191	-				-0.4
2,244,191	-				+0.5
2,244,191	-				+0.6
2,244,191	-				-0.9
2,244,191	-				-0.2
2,244,191	-				+0.3
2,244,191	-				-0.8
2,244,791	+		RR42_RS30605	0.55	+0.1
2,244,791	+		RR42_RS30605	0.55	+0.9
2,244,791	+		RR42_RS30605	0.55	+0.0
2,244,792	-		RR42_RS30605	0.55	-0.4