Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30570

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,232,642	-		RR42_RS30565	0.26	-1.1
2,232,642	-		RR42_RS30565	0.26	-1.1
2,232,730	-		RR42_RS30565	0.34	-1.0
2,232,870	-		RR42_RS30565	0.46	+1.5
2,233,184	+		RR42_RS30565	0.73	-1.4
2,233,185	-		RR42_RS30565	0.74	-0.6
2,233,217	+		RR42_RS30565	0.76	-1.4
2,233,460	+				+0.3
2,233,510	+				-2.1
2,233,511	-				+0.1
2,233,511	-				-0.3
2,233,551	+				-1.1
2,233,556	-				+1.2
2,233,556	-				-0.6
2,233,556	-				+0.8
2,233,626	+				-1.3
2,233,760	+		RR42_RS30570	0.83	+0.9
2,233,760	+		RR42_RS30570	0.83	-0.8
2,233,761	-		RR42_RS30570	0.84	+1.5
2,233,761	-		RR42_RS30570	0.84	+1.3
2,233,761	-		RR42_RS30570	0.84	+0.2
2,233,777	+				+0.3
2,233,777	+				+0.3
2,233,777	+				+1.1
2,233,777	+				-1.2
2,233,778	-				-0.7
2,233,778	-				-1.2
2,233,947	-				+1.6
2,233,947	-				-1.4
2,234,009	-				+0.8
2,234,024	-				+0.5
2,234,045	-				-0.2
2,234,045	-				+0.3
2,234,123	-				+1.3
2,234,123	-				+0.1
2,234,123	-				+0.3
2,234,245	-		RR42_RS30575	0.12	-0.1
2,234,245	-		RR42_RS30575	0.12	+1.3
2,234,258	+		RR42_RS30575	0.12	-0.2
2,234,259	-		RR42_RS30575	0.12	+0.2
2,234,444	-		RR42_RS30575	0.19	+0.3
2,234,581	+		RR42_RS30575	0.23	-0.6
2,234,581	+		RR42_RS30575	0.23	-0.2
2,234,582	-		RR42_RS30575	0.23	-0.7
2,234,582	-		RR42_RS30575	0.23	+0.0
2,234,582	-		RR42_RS30575	0.23	+0.2
2,234,582	-		RR42_RS30575	0.23	-0.7
2,234,582	-		RR42_RS30575	0.23	+0.9
2,234,653	+		RR42_RS30575	0.26	+0.3
2,234,653	+		RR42_RS30575	0.26	+1.2
2,234,667	+		RR42_RS30575	0.26	-0.3
2,234,668	-		RR42_RS30575	0.26	-0.6
2,234,668	-		RR42_RS30575	0.26	-0.4
2,234,668	-		RR42_RS30575	0.26	+0.6
2,234,740	+		RR42_RS30575	0.28	-0.6