Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30450

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,203,695	+		RR42_RS30435	0.26	+0.8
2,203,750	-		RR42_RS30435	0.44	-1.3
2,203,750	-		RR42_RS30435	0.44	-0.1
2,203,786	-		RR42_RS30435	0.55	-0.2
2,203,888	+		RR42_RS30435	0.87	+1.2
2,203,889	-		RR42_RS30435	0.87	-0.4
2,204,093	+		RR42_RS30440	0.35	-0.0
2,204,093	+		RR42_RS30440	0.35	+0.6
2,204,093	+		RR42_RS30440	0.35	+0.3
2,204,093	+		RR42_RS30440	0.35	+0.7
2,204,094	-		RR42_RS30440	0.36	-0.3
2,204,094	-		RR42_RS30440	0.36	+0.0
2,204,340	+				-0.5
2,204,413	+		RR42_RS30445	0.12	+1.3
2,204,413	+		RR42_RS30445	0.12	+1.1
2,204,414	-		RR42_RS30445	0.13	+0.1
2,204,414	-		RR42_RS30445	0.13	-1.1
2,204,414	-		RR42_RS30445	0.13	-0.1
2,204,532	-		RR42_RS30445	0.55	-0.7
2,204,532	-		RR42_RS30445	0.55	+0.9
2,204,592	-		RR42_RS30445	0.77	+1.1
2,204,640	+				+0.9
2,204,660	+				-0.1
2,204,660	+				+0.7
2,204,858	-		RR42_RS30450	0.43	+1.1
2,205,070	+		RR42_RS30450	0.86	+1.3
2,205,070	+		RR42_RS30450	0.86	-0.1
2,205,071	-		RR42_RS30450	0.86	+1.0
2,205,181	+				+0.3
2,205,223	+				+1.4
2,205,224	-				+1.2
2,205,670	+		RR42_RS30455	0.34	+0.7
2,205,671	-		RR42_RS30455	0.34	-0.2
2,205,671	-		RR42_RS30455	0.34	-0.4
2,205,673	+		RR42_RS30455	0.34	-0.5
2,205,732	+		RR42_RS30455	0.38	-1.0
2,205,751	+		RR42_RS30455	0.39	+0.1
2,205,751	+		RR42_RS30455	0.39	-0.7
2,205,752	-		RR42_RS30455	0.39	-0.8
2,205,907	+		RR42_RS30455	0.50	-0.8
2,205,907	+		RR42_RS30455	0.50	-2.2
2,205,907	+		RR42_RS30455	0.50	-0.3
2,205,907	+		RR42_RS30455	0.50	-1.0
2,205,908	-		RR42_RS30455	0.50	-0.3
2,205,908	-		RR42_RS30455	0.50	-1.2
2,205,908	-		RR42_RS30455	0.50	-0.3
2,205,967	+		RR42_RS30455	0.53	-0.4
2,205,967	+		RR42_RS30455	0.53	+0.3
2,205,968	-		RR42_RS30455	0.54	-0.4
2,206,097	+		RR42_RS30455	0.62	-0.1
2,206,097	+		RR42_RS30455	0.62	+0.5