Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30285

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,171,202	+				-1.1
2,171,227	+				+0.5
2,171,227	+				-0.8
2,171,227	+				+1.1
2,171,228	-				-1.0
2,171,404	+		RR42_RS30280	0.26	+1.0
2,171,404	+		RR42_RS30280	0.26	-1.5
2,171,405	-		RR42_RS30280	0.26	+0.0
2,171,405	-		RR42_RS30280	0.26	-1.0
2,171,497	+		RR42_RS30280	0.38	+0.3
2,171,498	-		RR42_RS30280	0.38	-0.0
2,171,498	-		RR42_RS30280	0.38	+0.2
2,171,768	-		RR42_RS30280	0.71	-1.1
2,171,930	-				+1.3
2,172,010	+				-0.2
2,172,011	-				-1.7
2,172,011	-				+0.2
2,173,248	+		RR42_RS30285	0.59	+1.5
2,173,775	+		RR42_RS30285	0.87	-0.1
2,173,775	+		RR42_RS30285	0.87	+1.3
2,173,972	+				+0.9
2,173,972	+				-0.8
2,173,972	+				-0.4
2,173,972	+				-0.1
2,174,549	+				+0.4
2,174,549	+				-0.4
2,174,550	-				+0.1
2,174,550	-				+0.6
2,174,552	-				+0.5
2,174,552	-				-1.3
2,174,591	+		RR42_RS30295	0.17	+0.7
2,174,591	+		RR42_RS30295	0.17	-0.0
2,174,592	-		RR42_RS30295	0.18	-0.7
2,174,592	-		RR42_RS30295	0.18	+0.9
2,174,592	-		RR42_RS30295	0.18	+1.6
2,174,799	+		RR42_RS30295	0.87	-0.9
2,174,940	+		RR42_RS30300	0.14	+0.9