Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30260

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,165,811	-		RR42_RS30255	0.39	+0.3
2,165,811	-		RR42_RS30255	0.39	-0.9
2,165,811	-		RR42_RS30255	0.39	+0.7
2,165,987	+		RR42_RS30255	0.50	+0.6
2,166,143	+		RR42_RS30255	0.60	+0.7
2,166,161	+		RR42_RS30255	0.61	-1.3
2,166,161	+		RR42_RS30255	0.61	-1.2
2,166,224	+		RR42_RS30255	0.65	-2.4
2,166,225	-		RR42_RS30255	0.65	-1.0
2,166,225	-		RR42_RS30255	0.65	-0.3
2,166,225	-		RR42_RS30255	0.65	-0.1
2,166,396	+		RR42_RS30255	0.76	-0.7
2,166,397	-		RR42_RS30255	0.76	+1.9
2,166,397	-		RR42_RS30255	0.76	-0.3
2,166,596	+		RR42_RS30255	0.88	+0.9
2,166,596	+		RR42_RS30255	0.88	+0.0
2,166,597	-		RR42_RS30255	0.88	+0.7
2,166,597	-		RR42_RS30255	0.88	+0.2
2,166,606	-		RR42_RS30255	0.89	-0.9
2,166,606	-		RR42_RS30255	0.89	+1.0
2,166,606	-		RR42_RS30255	0.89	-1.2
2,166,606	-		RR42_RS30255	0.89	-0.1
2,166,606	-		RR42_RS30255	0.89	-0.8
2,166,625	-				+0.3
2,166,625	-				+0.3
2,166,776	+				-0.6
2,166,977	+		RR42_RS30260	0.33	+0.3
2,166,977	+		RR42_RS30260	0.33	+0.5
2,166,977	+		RR42_RS30260	0.33	-0.4
2,166,978	-		RR42_RS30260	0.34	+0.8
2,166,978	-		RR42_RS30260	0.34	+0.3
2,167,024	+		RR42_RS30260	0.43	+1.0
2,167,024	+		RR42_RS30260	0.43	+1.1
2,167,025	-		RR42_RS30260	0.43	-1.9
2,167,025	-		RR42_RS30260	0.43	+0.8
2,167,114	+		RR42_RS30260	0.61	+0.7
2,167,277	+				+0.5
2,167,278	-				-0.1
2,167,278	-				-0.6
2,167,308	+				+0.9
2,167,308	+				+0.5
2,167,329	-				-0.4
2,167,333	-				-0.8
2,167,358	-				-0.7
2,167,384	+				+0.3
2,167,384	+				-0.2
2,167,384	+				-1.7
2,167,385	-				-2.9
2,167,388	+				-1.0
2,167,389	-				-1.1
2,167,389	-				-0.5
2,167,389	-				-0.9
2,167,400	+				-0.8
2,167,400	+				-0.9
2,167,401	-				+0.7
2,167,401	-				+1.0
2,167,460	+				-1.6
2,167,461	-				+1.3
2,167,461	-				-0.1
2,167,461	-				-0.2
2,167,461	-				+0.0
2,167,529	-				+0.1
2,167,567	+				-0.2
2,167,581	+				-0.1
2,167,582	-				+0.7
2,167,582	-				-0.8
2,167,672	+				-1.0
2,167,672	+				-0.7
2,167,673	-				-0.6
2,167,673	-				-1.0
2,167,731	+				+0.6
2,167,732	-				+0.0
2,167,923	-		RR42_RS30265	0.58	+1.3
2,168,033	-				-1.4
2,168,033	-				+0.8
2,168,033	-				-0.7
2,168,033	-				+1.9
2,168,033	-				+0.7
2,168,034	+				+1.1
2,168,034	+				+0.9
2,168,034	+				-0.4
2,168,035	-				-1.7
2,168,051	-				-1.4
2,168,051	-				+1.5
2,168,101	-				+1.0
2,168,101	-				-0.1
2,168,193	-				+0.9
2,168,193	-				+0.1
2,168,193	-				+0.8
2,168,205	-				-2.0
2,168,205	-				+0.5