Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29610

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,010,556	-		RR42_RS29605	0.37	+0.3
2,010,556	-		RR42_RS29605	0.37	-0.3
2,010,556	-		RR42_RS29605	0.37	+1.1
2,010,609	+		RR42_RS29605	0.47	+1.9
2,010,609	+		RR42_RS29605	0.47	+0.1
2,010,609	+		RR42_RS29605	0.47	+0.3
2,010,609	+		RR42_RS29605	0.47	+0.3
2,010,610	-		RR42_RS29605	0.48	-0.4
2,010,828	+				-0.2
2,010,916	+				-0.5
2,010,917	-				-1.0
2,010,917	-				+0.3
2,010,938	+				-0.2
2,010,938	+				+1.4
2,010,938	+				-0.0
2,010,938	+				+0.6
2,010,939	-				+1.0
2,010,939	-				+1.9
2,010,939	-				+0.3
2,010,947	-				-0.3
2,010,947	-				+1.2
2,011,037	+				+1.9
2,011,038	-				+0.2
2,011,038	-				+0.1
2,011,080	+				+0.3
2,011,114	-				+0.1
2,011,179	+				+0.3
2,011,179	+				+0.0
2,011,180	-				+1.2
2,011,180	-				+0.7
2,011,180	-				-0.3
2,011,249	+				+0.5
2,011,249	+				+0.5
2,011,250	-				+0.2
2,011,250	-				+1.7
2,011,250	-				-0.1
2,011,314	+				+0.4
2,011,314	+				+0.3
2,011,314	+				+0.6
2,011,314	+				+1.0
2,011,315	-				-0.9
2,011,315	-				-0.5
2,011,315	-				+0.9
2,011,384	+				+1.6
2,011,384	+				-1.4
2,011,503	+				-0.1
2,011,504	-				-1.2
2,011,704	+		RR42_RS29610	0.57	-0.3
2,011,704	+		RR42_RS29610	0.57	+2.5
2,011,705	-		RR42_RS29610	0.57	+1.9
2,011,843	+				-1.3
2,011,889	+				-0.1
2,011,890	-				-0.1
2,011,940	-				-0.4
2,012,051	+		RR42_RS29615	0.13	+0.1
2,012,052	-		RR42_RS29615	0.13	-0.6
2,012,134	-		RR42_RS29615	0.19	+0.4
2,012,134	-		RR42_RS29615	0.19	-1.0
2,012,176	+		RR42_RS29615	0.22	-0.8
2,012,421	+		RR42_RS29615	0.40	+0.3
2,012,421	+		RR42_RS29615	0.40	+0.4
2,012,421	+		RR42_RS29615	0.40	+0.3
2,012,421	+		RR42_RS29615	0.40	+1.0
2,012,421	+		RR42_RS29615	0.40	-1.1
2,012,421	+				+3.5
2,012,422	-		RR42_RS29615	0.40	-1.4
2,012,422	-		RR42_RS29615	0.40	-1.0
2,012,422	-		RR42_RS29615	0.40	+0.2
2,012,677	-		RR42_RS29615	0.58	+1.9
2,012,677	-		RR42_RS29615	0.58	-0.2
2,012,679	+		RR42_RS29615	0.58	-0.5
2,012,679	+		RR42_RS29615	0.58	+0.9
2,012,679	+		RR42_RS29615	0.58	+0.6
2,012,680	-		RR42_RS29615	0.58	+0.7
2,012,759	-		RR42_RS29615	0.64	+0.6
2,012,777	-		RR42_RS29615	0.65	-0.5
2,012,777	-		RR42_RS29615	0.65	+0.8
2,012,802	+		RR42_RS29615	0.67	-0.5