Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29335

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,934,088	+				+0.5
1,934,122	+				+1.2
1,934,132	+				+0.6
1,934,193	-				-1.8
1,934,219	-				+0.9
1,934,222	+				-0.3
1,934,222	+				-1.1
1,934,222	+				+0.5
1,934,342	+				-0.7
1,934,364	+				-1.9
1,934,391	+		RR42_RS29330	0.10	-0.2
1,934,391	+		RR42_RS29330	0.10	+0.1
1,934,703	+				-0.1
1,934,704	-				+0.3
1,934,704	-				-1.1
1,934,742	-				+0.3
1,934,857	+				+0.7
1,934,857	+				+0.1
1,934,857	+				-1.1
1,934,858	-				-0.4
1,934,858	-				+1.2
1,934,863	+				-1.4
1,934,901	+				+1.5
1,934,901	+				-1.6
1,934,901	+				+0.2
1,934,901	+				-0.9
1,934,902	-				+0.9
1,935,102	+				-1.1
1,935,102	+				-0.2
1,935,780	-		RR42_RS29335	0.78	+1.9
1,935,873	+		RR42_RS29335	0.88	-0.4
1,935,873	+		RR42_RS29335	0.88	-2.5
1,936,147	-				+0.4
1,936,147	-				+1.1
1,936,394	-		RR42_RS29340	0.11	-0.4
1,936,550	+		RR42_RS29340	0.27	-1.1
1,936,550	+		RR42_RS29340	0.27	-0.9
1,936,551	-		RR42_RS29340	0.27	+1.2
1,936,551	-		RR42_RS29340	0.27	+0.6
1,936,551	-		RR42_RS29340	0.27	-0.2
1,936,601	+		RR42_RS29340	0.32	+0.3
1,936,602	-		RR42_RS29340	0.32	-0.2
1,936,602	-		RR42_RS29340	0.32	+0.0
1,936,602	-		RR42_RS29340	0.32	-0.0