Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29305

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,924,616	+		RR42_RS29295	0.83	+0.6
1,924,616	+		RR42_RS29295	0.83	+0.9
1,924,617	-		RR42_RS29295	0.84	-0.2
1,924,737	+				-0.4
1,924,737	+				+0.4
1,924,738	-				-0.4
1,924,769	-				-1.2
1,924,769	-				+0.4
1,924,800	+				-0.2
1,924,800	+				-0.3
1,924,801	-				+1.9
1,924,880	+				+2.5
1,924,881	-				-0.3
1,924,884	+				+1.2
1,924,907	-				+0.2
1,924,915	+				-0.3
1,925,084	+				+1.2
1,925,085	-				+1.9
1,925,085	-				+0.9
1,925,138	-				+1.5
1,925,138	-				+0.5
1,925,298	-		RR42_RS29300	0.35	+2.1
1,925,366	-		RR42_RS29300	0.58	+0.5
1,925,805	+		RR42_RS29305	0.27	+1.9
1,925,814	-		RR42_RS29305	0.28	+0.9
1,925,842	+		RR42_RS29305	0.32	+1.2
1,925,842	+		RR42_RS29305	0.32	+0.9
1,925,843	-		RR42_RS29305	0.32	+1.9
1,925,843	-		RR42_RS29305	0.32	+0.9
1,925,959	-		RR42_RS29305	0.46	+1.5
1,925,970	+		RR42_RS29305	0.48	-0.4
1,925,971	-		RR42_RS29305	0.48	-0.5
1,925,971	-		RR42_RS29305	0.48	+1.2
1,926,048	-		RR42_RS29305	0.57	+0.3
1,926,164	+		RR42_RS29305	0.72	+1.2
1,926,165	-		RR42_RS29305	0.72	-1.3
1,926,165	-		RR42_RS29305	0.72	+1.0
1,926,407	+				-1.6
1,926,407	+				+0.5
1,926,407	+				-1.6
1,926,407	+				+1.9
1,926,407	+				-0.4
1,926,408	-				-0.9
1,926,408	-				+0.2
1,926,430	-				-0.3
1,926,486	-				-0.6
1,926,798	-		RR42_RS29310	0.21	-1.4
1,926,986	+		RR42_RS29310	0.34	-1.3
1,926,987	-		RR42_RS29310	0.34	+0.4
1,926,987	-		RR42_RS29310	0.34	+0.2
1,927,315	+		RR42_RS29310	0.57	-1.1
1,927,315	+		RR42_RS29310	0.57	-0.9
1,927,316	-		RR42_RS29310	0.57	-1.0
1,927,316	-		RR42_RS29310	0.57	+0.3
1,927,385	+		RR42_RS29310	0.62	-1.3
1,927,385	+		RR42_RS29310	0.62	-1.3
1,927,385	+		RR42_RS29310	0.62	-0.7
1,927,385	+		RR42_RS29310	0.62	+0.9
1,927,385	+		RR42_RS29310	0.62	-0.1
1,927,385	+		RR42_RS29310	0.62	-0.4
1,927,385	+		RR42_RS29310	0.62	+0.5
1,927,386	-		RR42_RS29310	0.62	+0.3
1,927,386	-		RR42_RS29310	0.62	+0.2
1,927,386	-		RR42_RS29310	0.62	+0.8
1,927,386	-		RR42_RS29310	0.62	+0.5