Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28905

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,839,917	+				-0.6
1,840,019	+				+0.8
1,840,019	+				+1.3
1,840,019	+				-1.4
1,840,020	-				-0.6
1,840,020	-				-0.8
1,840,055	+				+0.3
1,840,055	+				-0.1
1,840,055	+				+0.3
1,840,055	+				-0.7
1,840,055	+				+0.7
1,840,055	+				-1.1
1,840,056	-				-0.7
1,840,123	-		RR42_RS28900	0.15	+0.3
1,840,155	+		RR42_RS28900	0.21	+0.3
1,840,156	-		RR42_RS28900	0.22	-0.2
1,840,158	-		RR42_RS28900	0.22	+0.5
1,840,158	-		RR42_RS28900	0.22	-0.7
1,840,158	-		RR42_RS28900	0.22	-1.5
1,840,213	+		RR42_RS28900	0.33	-0.6
1,840,328	+		RR42_RS28900	0.56	-0.9
1,840,329	-		RR42_RS28900	0.56	+0.3
1,840,404	-		RR42_RS28900	0.71	-0.3
1,840,412	+		RR42_RS28900	0.72	-0.9
1,840,412	+		RR42_RS28900	0.72	+0.1
1,840,413	-		RR42_RS28900	0.72	-0.9
1,840,415	+		RR42_RS28900	0.73	+1.4
1,840,510	+				+0.8
1,840,510	+				+1.2
1,840,796	-				-0.3
1,841,168	+		RR42_RS28905	0.13	+0.0
1,841,169	-		RR42_RS28905	0.13	+0.5
1,841,256	+		RR42_RS28905	0.17	-0.5
1,841,262	+		RR42_RS28905	0.18	+1.9
1,841,262	+		RR42_RS28905	0.18	+0.6
1,841,319	+		RR42_RS28905	0.20	-2.8
1,841,497	+		RR42_RS28905	0.29	-1.3
1,841,498	-		RR42_RS28905	0.29	-0.8
1,841,498	-		RR42_RS28905	0.29	-0.5
1,841,498	-		RR42_RS28905	0.29	-0.3
1,841,498	-		RR42_RS28905	0.29	+0.2
1,841,508	+		RR42_RS28905	0.30	-1.2
1,841,509	-		RR42_RS28905	0.30	-0.4
1,842,272	+		RR42_RS28905	0.68	-1.1
1,842,272	+		RR42_RS28905	0.68	+0.1
1,842,272	+		RR42_RS28905	0.68	+1.1
1,842,272	+		RR42_RS28905	0.68	+0.1
1,842,272	+		RR42_RS28905	0.68	-1.4
1,842,273	-		RR42_RS28905	0.68	-0.3
1,842,314	-		RR42_RS28905	0.70	-0.5
1,842,424	+		RR42_RS28905	0.75	-0.3
1,842,424	+		RR42_RS28905	0.75	+0.5
1,842,424	+		RR42_RS28905	0.75	-0.1
1,842,425	-		RR42_RS28905	0.75	+0.6
1,842,453	-		RR42_RS28905	0.77	-1.5
1,842,515	+		RR42_RS28905	0.80	+0.7
1,842,516	-		RR42_RS28905	0.80	-1.5
1,842,526	+		RR42_RS28905	0.80	-0.3
1,842,527	-		RR42_RS28905	0.80	+0.9
1,842,802	+				-0.8
1,842,802	+				+3.5
1,842,803	-				-0.1
1,842,803	-				+1.2
1,842,803	-				-0.2
1,842,803	-				-0.4
1,842,862	+				+1.3
1,842,881	-				-0.7
1,842,925	+				-0.7
1,842,925	+				+1.1
1,842,925	+				-0.9
1,842,925	+				+0.3
1,842,925	+				-0.1
1,842,926	-				-2.0
1,842,959	+				-0.8
1,843,050	+				-0.2
1,843,050	+				+0.2
1,843,050	+				-0.4
1,843,050	+				-1.2
1,843,051	-				-0.9
1,843,139	-				+0.1
1,843,141	-				+0.5
1,843,186	-		RR42_RS28910	0.15	-0.7
1,843,186	-		RR42_RS28910	0.15	-0.4
1,843,312	+		RR42_RS28910	0.29	+1.6
1,843,312	+		RR42_RS28910	0.29	+1.2
1,843,313	-		RR42_RS28910	0.30	+1.3
1,843,313	-		RR42_RS28910	0.30	-1.1