Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27830

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,606,988	+				-0.2
1,606,989	-				-0.2
1,607,253	-		RR42_RS27825	0.13	-0.8
1,607,319	-		RR42_RS27825	0.22	-1.3
1,607,348	+		RR42_RS27825	0.26	+0.5
1,607,349	-		RR42_RS27825	0.26	+0.8
1,607,492	+		RR42_RS27825	0.46	-0.2
1,607,493	-		RR42_RS27825	0.46	-0.5
1,607,493	-		RR42_RS27825	0.46	+0.4
1,607,493	-		RR42_RS27825	0.46	+2.0
1,607,493	-		RR42_RS27825	0.46	-0.1
1,607,493	-		RR42_RS27825	0.46	+0.9
1,607,543	+		RR42_RS27825	0.53	-1.4
1,607,546	+		RR42_RS27825	0.53	-0.9
1,607,838	+				+1.3
1,607,838	+				-0.2
1,607,948	+				-0.9
1,607,948	+				+0.8
1,608,043	+		RR42_RS27830	0.21	-0.7
1,608,043	+		RR42_RS27830	0.21	-0.6
1,608,044	-		RR42_RS27830	0.21	+0.6
1,608,138	+		RR42_RS27830	0.33	+0.7
1,608,138	+		RR42_RS27830	0.33	+0.0
1,608,139	-		RR42_RS27830	0.33	-1.2
1,608,139	-		RR42_RS27830	0.33	-1.3
1,608,139	-		RR42_RS27830	0.33	-0.9
1,608,139	-		RR42_RS27830	0.33	+0.0
1,608,139	-		RR42_RS27830	0.33	-1.9
1,608,163	+		RR42_RS27830	0.36	-2.2
1,608,164	-		RR42_RS27830	0.37	+0.4
1,608,172	+		RR42_RS27830	0.38	-0.2
1,608,173	-		RR42_RS27830	0.38	-1.3
1,608,235	+		RR42_RS27830	0.46	+2.3
1,608,235	+		RR42_RS27830	0.46	+0.3
1,608,241	+		RR42_RS27830	0.47	-0.1
1,608,241	+		RR42_RS27830	0.47	+1.0
1,608,242	-		RR42_RS27830	0.47	-0.6
1,608,272	-		RR42_RS27830	0.51	+2.0
1,608,298	+		RR42_RS27830	0.54	+1.0
1,608,298	+		RR42_RS27830	0.54	+0.4
1,608,481	+		RR42_RS27830	0.78	+0.1
1,608,482	-		RR42_RS27830	0.78	-1.3
1,608,872	+		RR42_RS27835	0.11	-1.1
1,608,872	+		RR42_RS27835	0.11	-0.2
1,609,095	+		RR42_RS27835	0.26	+0.9
1,609,096	-		RR42_RS27835	0.27	-0.4
1,609,096	-		RR42_RS27835	0.27	+0.4