Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27575

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,551,143	+				-0.1
1,551,144	-				+0.1
1,551,144	-				-0.3
1,551,146	+				+1.5
1,551,146	+				-1.7
1,551,147	-				+1.1
1,551,147	-				-0.0
1,551,164	+		RR42_RS27570	0.10	+0.9
1,551,165	-		RR42_RS27570	0.11	+1.3
1,551,165	-		RR42_RS27570	0.11	+2.5
1,551,261	-		RR42_RS27570	0.24	-0.0
1,551,783	-				+0.2
1,551,797	-				-0.8
1,551,797	-				+0.3
1,551,797	-				+0.1
1,551,854	-				-0.1
1,552,087	+				-0.8
1,552,105	-				-0.6
1,552,235	+		RR42_RS27575	0.12	+0.4
1,552,236	-		RR42_RS27575	0.12	-1.1
1,552,367	+		RR42_RS27575	0.23	+0.9
1,552,367	+		RR42_RS27575	0.23	-1.4
1,552,367	+		RR42_RS27575	0.23	-0.5
1,552,367	+		RR42_RS27575	0.23	+0.9
1,552,368	-		RR42_RS27575	0.23	-0.2
1,552,554	+		RR42_RS27575	0.39	-0.1
1,552,554	+		RR42_RS27575	0.39	-0.5
1,552,554	+		RR42_RS27575	0.39	+0.1
1,552,554	+		RR42_RS27575	0.39	-0.0
1,552,554	+		RR42_RS27575	0.39	-0.3
1,552,554	+		RR42_RS27575	0.39	-1.4
1,552,554	+		RR42_RS27575	0.39	+1.0
1,552,554	+		RR42_RS27575	0.39	-0.3
1,552,555	-		RR42_RS27575	0.40	+0.1
1,552,753	+		RR42_RS27575	0.57	-0.5
1,552,754	-		RR42_RS27575	0.57	-0.8
1,552,757	+		RR42_RS27575	0.57	-1.3
1,552,757	+		RR42_RS27575	0.57	-0.2
1,552,758	-		RR42_RS27575	0.57	+0.5
1,552,766	+		RR42_RS27575	0.58	-0.9
1,552,767	-		RR42_RS27575	0.58	-0.1
1,552,767	-		RR42_RS27575	0.58	+0.1
1,552,767	-		RR42_RS27575	0.58	-0.2
1,552,924	-		RR42_RS27575	0.71	+1.4
1,553,252	+				-0.8
1,553,252	+				+0.3
1,553,253	-				+0.3
1,553,255	+				-0.7
1,553,256	-				-0.3
1,553,304	+				+0.6
1,553,304	+				+1.4
1,553,304	+				-0.0
1,553,304	+				-1.1
1,553,305	-				+1.5
1,553,347	-				+0.5
1,553,415	+				+0.3
1,553,415	+				-0.1
1,553,415	+				-0.4
1,553,415	+				+1.2
1,553,416	-				+1.1
1,553,643	+		RR42_RS27580	0.33	-1.8
1,553,785	-		RR42_RS27580	0.49	+1.6
1,553,845	-		RR42_RS27580	0.55	+0.1
1,553,901	+		RR42_RS27580	0.61	+0.2
1,553,901	+		RR42_RS27580	0.61	-0.4
1,553,901	+		RR42_RS27580	0.61	+0.0
1,554,057	+		RR42_RS27580	0.78	-0.8
1,554,057	+		RR42_RS27580	0.78	+0.4
1,554,058	-		RR42_RS27580	0.78	+0.5
1,554,058	-		RR42_RS27580	0.78	+0.5