Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27410

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,499,627	+		RR42_RS27405	0.35	+1.1
1,499,627	+		RR42_RS27405	0.35	+1.0
1,499,628	-		RR42_RS27405	0.35	+0.1
1,499,786	+		RR42_RS27405	0.47	+1.3
1,499,786	+		RR42_RS27405	0.47	+0.5
1,499,787	-		RR42_RS27405	0.47	+0.3
1,499,787	-		RR42_RS27405	0.47	-0.8
1,500,110	+		RR42_RS27405	0.71	+0.2
1,500,111	-		RR42_RS27405	0.71	+1.1
1,500,113	+		RR42_RS27405	0.71	-0.6
1,500,257	+		RR42_RS27405	0.82	-0.0
1,500,257	+		RR42_RS27405	0.82	+0.8
1,500,258	-		RR42_RS27405	0.82	+0.5
1,500,383	+				-1.2
1,500,383	+				-0.6
1,500,383	+				-0.2
1,500,383	+				+0.8
1,500,383	+				-1.9
1,500,383	+				-0.2
1,500,384	-				+0.0
1,500,384	-				+0.0
1,500,384	-				+2.1
1,500,384	-				-0.2
1,500,590	+				-0.4
1,500,590	+				-0.2
1,500,591	-				-0.5
1,500,596	+				+0.4
1,500,856	+		RR42_RS27410	0.28	-1.0
1,500,857	-		RR42_RS27410	0.28	-1.2
1,501,188	-		RR42_RS27410	0.62	-0.9
1,501,232	+		RR42_RS27410	0.67	-0.4
1,501,233	-		RR42_RS27410	0.67	+0.5
1,501,233	-		RR42_RS27410	0.67	-0.1
1,501,233	-		RR42_RS27410	0.67	-1.4
1,501,714	+				+2.1
1,502,088	+		RR42_RS27415	0.26	-0.5
1,502,088	+		RR42_RS27415	0.26	-0.1
1,502,155	+		RR42_RS27415	0.30	+1.2
1,502,155	+		RR42_RS27415	0.30	-1.2
1,502,156	-		RR42_RS27415	0.30	-0.3
1,502,518	+		RR42_RS27415	0.53	+1.5
1,502,518	+		RR42_RS27415	0.53	-2.5