Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26995

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,410,196	-		RR42_RS26990	0.58	+0.5
1,410,196	-		RR42_RS26990	0.58	+0.2
1,410,222	+		RR42_RS26990	0.59	-1.4
1,410,222	+		RR42_RS26990	0.59	-0.4
1,410,222	+		RR42_RS26990	0.59	-0.9
1,410,222	+		RR42_RS26990	0.59	-0.8
1,410,223	-		RR42_RS26990	0.59	-0.2
1,410,223	-		RR42_RS26990	0.59	+0.2
1,410,223	-		RR42_RS26990	0.59	-0.8
1,410,223	-		RR42_RS26990	0.59	+0.1
1,410,223	-		RR42_RS26990	0.59	-0.6
1,410,252	+		RR42_RS26990	0.61	+0.1
1,410,252	+		RR42_RS26990	0.61	+0.1
1,410,253	-		RR42_RS26990	0.61	-0.2
1,410,456	+		RR42_RS26990	0.73	+0.1
1,410,620	+		RR42_RS26990	0.83	-1.4
1,410,690	+		RR42_RS26990	0.88	-2.1
1,410,721	+		RR42_RS26990	0.90	-0.9
1,410,721	+		RR42_RS26990	0.90	+0.1
1,410,768	-				+0.5
1,410,789	+				+2.0
1,410,789	+				-0.4
1,410,853	+				+0.8
1,410,854	-				+0.8
1,410,854	-				-2.1
1,410,854	-				+1.3
1,410,854	-				-0.6
1,410,854	-				-0.1
1,411,008	-		RR42_RS26995	0.41	+1.2
1,411,106	+		RR42_RS26995	0.75	-0.2
1,411,194	+				+0.1
1,411,194	+				-0.2
1,411,195	-				-2.0
1,411,272	+		RR42_RS27000	0.11	+0.5
1,411,272	+		RR42_RS27000	0.11	-0.9
1,411,272	+		RR42_RS27000	0.11	-0.5
1,411,272	+		RR42_RS27000	0.11	-0.9
1,411,272	+		RR42_RS27000	0.11	+0.2
1,411,287	+		RR42_RS27000	0.13	-0.2
1,411,344	+		RR42_RS27000	0.21	+0.3
1,411,344	+		RR42_RS27000	0.21	+0.9
1,411,464	+		RR42_RS27000	0.37	+0.4
1,411,464	+		RR42_RS27000	0.37	+1.1
1,411,465	-		RR42_RS27000	0.38	-0.8
1,411,465	-		RR42_RS27000	0.38	+0.5
1,411,527	-		RR42_RS27000	0.46	+0.9
1,411,527	-		RR42_RS27000	0.46	+0.9
1,411,733	+		RR42_RS27000	0.75	-0.6
1,411,809	+		RR42_RS27000	0.85	-0.4
1,411,809	+		RR42_RS27000	0.85	+3.7