Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26710

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,348,936	-		RR42_RS26705	0.65	+0.5
1,349,083	+		RR42_RS26705	0.82	+0.1
1,349,083	+		RR42_RS26705	0.82	+0.0
1,349,086	+		RR42_RS26705	0.83	+0.6
1,349,086	+		RR42_RS26705	0.83	+0.0
1,349,086	+		RR42_RS26705	0.83	-0.9
1,349,086	+		RR42_RS26705	0.83	-0.4
1,349,087	-		RR42_RS26705	0.83	+1.7
1,349,087	-		RR42_RS26705	0.83	-0.2
1,349,087	-		RR42_RS26705	0.83	-2.2
1,349,087	-		RR42_RS26705	0.83	-0.7
1,349,087	-		RR42_RS26705	0.83	-0.2
1,349,087	-		RR42_RS26705	0.83	+3.7
1,349,087	-		RR42_RS26705	0.83	-0.5
1,349,087	-		RR42_RS26705	0.83	+0.1
1,349,090	+		RR42_RS26705	0.83	+1.0
1,349,288	+				+1.0
1,349,289	-				+0.9
1,349,318	+				-0.5
1,349,405	-				-0.3
1,349,406	+				+0.2
1,349,454	-				-0.0
1,349,454	-				-1.5
1,349,595	-				-0.4
1,349,610	+				-0.7
1,349,610	+				+1.1
1,349,611	-				-2.1
1,349,639	+				+1.0
1,349,639	+				+0.4
1,349,639	+				+1.1
1,349,640	-				-1.2
1,349,640	-				-1.3
1,349,640	-				-0.3
1,349,640	-				+1.5
1,349,804	+				-0.3
1,349,805	-				+0.4
1,349,805	-				+0.2
1,349,903	+		RR42_RS26710	0.16	-0.4
1,349,904	-		RR42_RS26710	0.17	+0.5
1,349,904	-		RR42_RS26710	0.17	+1.0
1,350,176	+		RR42_RS26710	0.41	-1.2
1,350,176	+		RR42_RS26710	0.41	+0.2
1,350,176	+		RR42_RS26710	0.41	+0.3
1,350,176	+		RR42_RS26710	0.41	-0.0
1,350,176	+		RR42_RS26710	0.41	+1.8
1,350,177	-		RR42_RS26710	0.41	-0.2
1,350,177	-		RR42_RS26710	0.41	-0.3
1,350,177	-		RR42_RS26710	0.41	+1.3
1,350,180	-		RR42_RS26710	0.41	-0.4
1,350,296	+		RR42_RS26710	0.52	+0.5
1,350,297	-		RR42_RS26710	0.52	+0.1
1,350,297	-		RR42_RS26710	0.52	+1.3
1,350,335	-		RR42_RS26710	0.55	+0.5
1,350,668	+		RR42_RS26710	0.85	-0.7
1,350,671	+		RR42_RS26710	0.86	-0.5
1,350,672	-		RR42_RS26710	0.86	+0.9
1,350,672	-		RR42_RS26710	0.86	+0.9
1,350,672	-		RR42_RS26710	0.86	-0.3
1,350,734	+				+3.4
1,351,018	+		RR42_RS26715	0.17	+0.1
1,351,019	-		RR42_RS26715	0.17	+0.5
1,351,019	-		RR42_RS26715	0.17	+1.5
1,351,409	-		RR42_RS26715	0.58	+0.7
1,351,483	+		RR42_RS26715	0.65	-0.3
1,351,483	+		RR42_RS26715	0.65	+0.4
1,351,484	-		RR42_RS26715	0.65	+1.5
1,351,574	-		RR42_RS26715	0.75	+0.7
1,351,723	+				-1.3
1,351,723	+				+0.1
1,351,723	+				+2.7
1,351,723	+				-0.4