Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25885

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,147,266	-		RR42_RS25880	0.62	+1.6
1,147,292	+		RR42_RS25880	0.65	+0.6
1,147,293	-		RR42_RS25880	0.65	+0.9
1,147,313	+		RR42_RS25880	0.68	+0.6
1,147,393	+		RR42_RS25880	0.77	-0.5
1,147,393	+		RR42_RS25880	0.77	+1.5
1,147,393	+		RR42_RS25880	0.77	-0.3
1,147,394	-		RR42_RS25880	0.77	+0.0
1,147,394	-		RR42_RS25880	0.77	-1.9
1,147,428	+		RR42_RS25880	0.82	+0.6
1,147,429	-		RR42_RS25880	0.82	+0.2
1,147,429	-		RR42_RS25880	0.82	+1.5
1,147,508	+				+0.6
1,147,509	-				-0.4
1,147,509	-				+1.7
1,147,545	+				-0.5
1,147,545	+				+0.1
1,147,546	-				-1.4
1,147,546	-				+0.5
1,147,567	+				-0.5
1,147,568	-				-1.1
1,147,597	+				+1.1
1,147,606	-				+3.2
1,147,610	+				+1.3
1,147,610	+				+1.2
1,147,610	+				+1.1
1,147,611	-				-0.3
1,147,620	+				+0.8
1,147,638	+				-0.0
1,147,638	+				-0.6
1,147,639	-				-0.5
1,147,655	+				-1.9
1,147,655	+				-0.3
1,147,656	-				-0.6
1,147,656	-				+0.2
1,147,706	+				-0.3
1,147,706	+				+0.2
1,147,707	-				-0.7
1,147,733	+				+0.1
1,147,734	-				+0.3
1,147,843	-				-1.5
1,147,843	-				-0.8
1,147,888	+				-0.7
1,147,889	-				-1.5
1,147,967	+				+0.1
1,147,967	+				+0.2
1,147,967	+				-1.1
1,148,032	+				-0.5
1,148,033	-				-0.7
1,148,039	+				-0.4
1,148,039	+				-0.7
1,148,040	-				+1.6
1,148,040	-				-0.1
1,148,040	-				+0.2
1,148,158	+				+1.2
1,148,159	-				-0.7
1,148,173	-		RR42_RS25885	0.10	-0.1
1,148,219	+		RR42_RS25885	0.14	-0.3
1,148,219	+		RR42_RS25885	0.14	-2.7
1,148,220	-		RR42_RS25885	0.14	-2.4
1,148,300	+		RR42_RS25885	0.21	-0.6
1,148,301	-		RR42_RS25885	0.21	-0.1
1,148,445	+		RR42_RS25885	0.34	-0.9
1,148,445	+		RR42_RS25885	0.34	-0.3
1,148,445	+		RR42_RS25885	0.34	-0.9
1,148,446	-		RR42_RS25885	0.34	-0.5
1,148,446	-		RR42_RS25885	0.34	+0.8
1,148,454	+		RR42_RS25885	0.35	+0.2
1,148,590	+		RR42_RS25885	0.47	-0.2
1,148,591	-		RR42_RS25885	0.47	-0.2
1,148,627	+		RR42_RS25885	0.50	+1.5
1,148,628	-		RR42_RS25885	0.50	+0.2
1,148,639	+		RR42_RS25885	0.51	+1.2
1,148,776	+		RR42_RS25885	0.63	-0.3
1,148,777	-		RR42_RS25885	0.63	+0.6
1,148,777	-		RR42_RS25885	0.63	-0.8
1,149,153	+				-1.0
1,149,154	-				+0.4
1,149,154	-				-1.0
1,149,197	+				+1.1
1,149,363	+				-0.8
1,149,363	+				-0.1
1,149,363	+				-0.2
1,149,558	-		RR42_RS25890	0.10	+0.3
1,149,558	-		RR42_RS25890	0.10	+1.1
1,149,609	-		RR42_RS25890	0.15	-0.4
1,149,650	-		RR42_RS25890	0.19	-0.0
1,149,657	+		RR42_RS25890	0.19	-0.3
1,149,658	-		RR42_RS25890	0.19	+0.3
1,149,658	-		RR42_RS25890	0.19	+0.7
1,149,691	-		RR42_RS25890	0.22	+0.6
1,149,867	+		RR42_RS25890	0.38	-1.0
1,149,867	+		RR42_RS25890	0.38	+0.1
1,149,867	+		RR42_RS25890	0.38	-0.4
1,150,011	+		RR42_RS25890	0.52	+0.2
1,150,011	+		RR42_RS25890	0.52	-0.1
1,150,011	+		RR42_RS25890	0.52	+0.0
1,150,012	-		RR42_RS25890	0.52	+0.6
1,150,062	+		RR42_RS25890	0.56	+0.6
1,150,063	-		RR42_RS25890	0.56	-0.9