Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25785

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,123,171	+		RR42_RS25780	0.25	+0.6
1,123,171	+		RR42_RS25780	0.25	+1.2
1,123,171	+		RR42_RS25780	0.25	-0.7
1,123,172	-		RR42_RS25780	0.25	-0.8
1,123,172	-		RR42_RS25780	0.25	-0.1
1,123,172	-		RR42_RS25780	0.25	-0.2
1,123,172	-		RR42_RS25780	0.25	+0.4
1,123,174	-		RR42_RS25780	0.26	-0.8
1,123,174	-		RR42_RS25780	0.26	+0.2
1,123,249	-		RR42_RS25780	0.35	-0.7
1,123,249	-		RR42_RS25780	0.35	-0.2
1,123,269	+		RR42_RS25780	0.37	+1.0
1,123,269	+		RR42_RS25780	0.37	+0.5
1,123,269	+		RR42_RS25780	0.37	+1.2
1,123,269	+		RR42_RS25780	0.37	-1.1
1,123,269	+		RR42_RS25780	0.37	+0.1
1,123,270	-		RR42_RS25780	0.37	-0.4
1,123,270	-		RR42_RS25780	0.37	-1.1
1,123,270	-		RR42_RS25780	0.37	-0.4
1,123,270	-		RR42_RS25780	0.37	-1.4
1,123,357	-		RR42_RS25780	0.48	-0.7
1,123,446	+		RR42_RS25780	0.59	+0.6
1,123,545	+		RR42_RS25780	0.71	+1.7
1,123,546	-		RR42_RS25780	0.71	-0.6
1,123,780	+				-0.4
1,123,781	-				+0.2
1,123,781	-				+1.2
1,123,803	+				+1.6
1,123,804	-				+2.2
1,123,821	+				+0.6
1,123,822	-				+0.5
1,123,822	-				+0.3
1,123,994	+				-2.7
1,123,996	-				-1.1
1,124,024	+				+2.2
1,124,024	+				-1.1
1,124,141	+				+1.2
1,124,156	-				-0.7
1,124,229	+		RR42_RS25785	0.11	+1.6
1,124,455	+		RR42_RS25785	0.43	+0.9
1,124,559	-		RR42_RS25785	0.58	+1.4
1,124,903	-				+1.3
1,124,937	+				+1.6
1,124,938	-				-0.9
1,124,938	-				-0.3
1,125,006	+				+0.0
1,125,007	-				-1.4
1,125,133	+				+0.9
1,125,141	-				-0.8
1,125,162	+				-1.8
1,125,351	+				+1.2
1,125,364	+				+1.2
1,125,445	+		RR42_RS25790	0.12	+0.6
1,125,588	+		RR42_RS25790	0.18	+1.1
1,125,589	-		RR42_RS25790	0.19	-0.6
1,125,674	-		RR42_RS25790	0.22	-0.3
1,125,717	+		RR42_RS25790	0.24	-1.1
1,125,718	-		RR42_RS25790	0.24	-0.3