Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25625
Experiment: R2A with Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,091,055 | - | RR42_RS25615 | 0.43 | -1.6 | |
1,091,100 | + | RR42_RS25615 | 0.51 | -0.9 | |
1,091,212 | + | RR42_RS25615 | 0.70 | -1.0 | |
1,091,381 | + | +2.3 | |||
1,091,382 | - | +2.8 | |||
1,091,382 | - | -0.4 | |||
1,091,685 | + | RR42_RS25620 | 0.55 | +0.6 | |
1,091,685 | + | RR42_RS25620 | 0.55 | +0.5 | |
1,091,685 | + | RR42_RS25620 | 0.55 | +0.8 | |
1,091,685 | + | RR42_RS25620 | 0.55 | +0.0 | |
1,091,701 | + | RR42_RS25620 | 0.58 | -1.0 | |
1,091,701 | + | RR42_RS25620 | 0.58 | -0.1 | |
1,091,704 | - | RR42_RS25620 | 0.58 | +0.3 | |
1,091,887 | - | +0.0 | |||
1,091,887 | - | -1.3 | |||
1,091,921 | + | +0.3 | |||
1,092,083 | - | -0.8 | |||
1,092,083 | - | +2.0 | |||
1,092,097 | + | -0.8 | |||
1,092,098 | - | -1.6 | |||
1,092,098 | - | +0.7 | |||
1,092,158 | - | RR42_RS25625 | 0.16 | -1.8 | |
1,092,164 | - | RR42_RS25625 | 0.16 | +0.5 | |
1,092,164 | - | RR42_RS25625 | 0.16 | -1.9 | |
1,093,049 | - | +0.5 |
Or see this region's nucleotide sequence