Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25460

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,057,974	+		RR42_RS25455	0.43	-0.0
1,058,589	+				-0.0
1,058,784	+				-0.7
1,058,785	-				+0.1
1,058,880	-		RR42_RS25460	0.11	-0.6
1,059,119	+		RR42_RS25460	0.40	+0.2
1,059,184	+		RR42_RS25460	0.47	-1.3
1,059,217	+		RR42_RS25460	0.51	-1.1
1,059,217	+		RR42_RS25460	0.51	-0.9
1,059,219	+		RR42_RS25460	0.51	-2.5
1,059,220	-		RR42_RS25460	0.51	-0.6
1,059,220	-		RR42_RS25460	0.51	+0.5
1,059,220	-		RR42_RS25460	0.51	+0.0
1,059,418	+		RR42_RS25460	0.75	+0.4
1,059,418	+		RR42_RS25460	0.75	+0.6
1,059,419	-		RR42_RS25460	0.75	-0.7
1,059,419	-		RR42_RS25460	0.75	-0.5
1,059,420	+		RR42_RS25460	0.75	-0.9
1,059,421	-		RR42_RS25460	0.75	+0.6
1,059,663	-				+0.9
1,059,676	-				+1.4
1,059,689	+				+0.2
1,059,689	+				+1.6
1,059,730	+				-1.1
1,059,730	+				-0.2
1,059,749	+				-0.0
1,059,750	-				+1.3
1,059,750	-				+0.6
1,059,750	-				-0.7
1,059,777	-				+0.5
1,059,908	+		RR42_RS25465	0.16	+1.9
1,059,908	+		RR42_RS25465	0.16	-0.1
1,059,908	+		RR42_RS25465	0.16	+0.7
1,059,909	-		RR42_RS25465	0.16	-0.5
1,060,023	+		RR42_RS25465	0.23	+0.6
1,060,024	-		RR42_RS25465	0.23	+1.6
1,060,030	-		RR42_RS25465	0.24	-1.3
1,060,038	+		RR42_RS25465	0.24	-1.2
1,060,038	+		RR42_RS25465	0.24	+0.0
1,060,039	-		RR42_RS25465	0.24	-1.0
1,060,137	+		RR42_RS25465	0.30	-0.6
1,060,137	+		RR42_RS25465	0.30	-1.0
1,060,183	+		RR42_RS25465	0.33	+0.6
1,060,183	+		RR42_RS25465	0.33	+0.7
1,060,184	-		RR42_RS25465	0.33	+0.7
1,060,184	-		RR42_RS25465	0.33	-0.8
1,060,184	-		RR42_RS25465	0.33	+0.6
1,060,184	-		RR42_RS25465	0.33	+1.5
1,060,308	+		RR42_RS25465	0.41	+1.9
1,060,308	+		RR42_RS25465	0.41	-1.9
1,060,309	-		RR42_RS25465	0.41	+0.3
1,060,518	+		RR42_RS25465	0.53	-0.1
1,060,518	+		RR42_RS25465	0.53	+2.1
1,060,519	-		RR42_RS25465	0.53	+1.1
1,060,519	-		RR42_RS25465	0.53	+0.5
1,060,519	-		RR42_RS25465	0.53	-0.3
1,060,533	-		RR42_RS25465	0.54	-0.7
1,060,566	-		RR42_RS25465	0.56	+1.0
1,060,613	+		RR42_RS25465	0.59	-0.2