Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS22570
Experiment: R2A with Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
398,853 | - | +0.7 | |||
399,150 | + | +0.7 | |||
399,150 | + | +0.8 | |||
399,630 | - | +1.1 | |||
399,630 | - | -1.6 | |||
399,691 | + | -0.5 | |||
399,692 | - | -1.0 | |||
399,692 | - | -1.4 | |||
399,716 | + | -0.8 | |||
399,725 | + | -1.1 | |||
399,726 | - | -0.7 | |||
399,733 | + | +0.6 | |||
399,733 | + | +0.3 | |||
399,733 | + | -0.0 | |||
399,734 | - | -0.7 | |||
399,734 | - | +0.5 | |||
399,734 | - | -0.8 | |||
399,734 | - | -0.3 | |||
399,768 | + | -0.3 | |||
399,769 | - | +0.6 | |||
399,926 | + | RR42_RS22570 | 0.14 | +0.5 | |
400,326 | - | RR42_RS22570 | 0.68 | +0.8 | |
400,612 | - | -1.3 | |||
400,621 | - | +0.6 | |||
400,685 | + | -0.7 | |||
400,686 | - | +0.9 | |||
400,844 | + | +0.7 | |||
400,844 | + | -0.7 | |||
400,845 | - | +0.5 | |||
401,001 | + | RR42_RS22575 | 0.20 | -1.8 | |
401,416 | - | RR42_RS22575 | 0.71 | -0.0 |
Or see this region's nucleotide sequence