Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20570

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,464,521	+		RR42_RS20565	0.78	+0.6
4,464,521	+		RR42_RS20565	0.78	+1.1
4,464,522	-		RR42_RS20565	0.78	+2.1
4,464,555	-		RR42_RS20565	0.79	+0.4
4,464,692	+		RR42_RS20565	0.82	-0.1
4,464,854	-		RR42_RS20565	0.86	-0.2
4,464,915	+		RR42_RS20565	0.87	+1.4
4,465,435	+				-1.7
4,465,435	+				-0.5
4,465,457	+				-0.5
4,465,458	-				-2.0
4,465,458	-				-0.1
4,465,517	+		RR42_RS20570	0.18	-0.8
4,465,596	-		RR42_RS20570	0.33	-1.1
4,466,058	+		RR42_RS20575	0.39	+1.0
4,466,197	+		RR42_RS20575	0.82	+0.7
4,466,224	+				+1.7
4,466,224	+				+0.0
4,466,224	+				+0.9
4,466,224	+				-0.2
4,466,225	-				+0.2
4,466,225	-				-0.0
4,466,225	-				-0.9
4,466,251	+				-1.0
4,466,262	-				+1.1
4,466,264	+				+1.1
4,466,264	+				-0.8
4,466,265	-				+0.2
4,466,296	+				+0.4
4,466,297	-				+1.8
4,466,300	+				+0.2
4,466,467	+		RR42_RS20580	0.10	-0.3
4,466,467	+		RR42_RS20580	0.10	-0.5
4,466,467	+		RR42_RS20580	0.10	+0.9
4,466,467	+		RR42_RS20580	0.10	+0.4
4,466,468	-		RR42_RS20580	0.10	-0.9
4,466,468	-		RR42_RS20580	0.10	+0.1
4,466,641	+		RR42_RS20580	0.31	+0.3
4,466,641	+		RR42_RS20580	0.31	-1.2
4,466,687	-		RR42_RS20580	0.37	+1.1
4,466,716	+		RR42_RS20580	0.41	-0.2