Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20465

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,432,678	+				+0.9
4,432,704	+				-0.4
4,432,704	+				+0.1
4,432,704	+				-0.5
4,432,704	+				-0.0
4,432,705	-				-0.3
4,432,705	-				+1.7
4,432,705	-				+0.9
4,432,705	-				-0.8
4,432,708	+				+0.1
4,432,708	+				-1.5
4,432,709	-				-0.1
4,432,711	+				-2.4
4,432,806	+				-0.4
4,432,807	-				+1.0
4,433,199	+		RR42_RS20460	0.61	+0.7
4,433,227	+		RR42_RS20460	0.66	+0.2
4,433,228	-		RR42_RS20460	0.66	-0.2
4,433,365	+		RR42_RS20460	0.87	+1.7
4,433,366	-		RR42_RS20460	0.87	-1.3
4,433,366	-		RR42_RS20460	0.87	+0.2
4,433,367	+		RR42_RS20460	0.88	-2.0
4,433,367	+		RR42_RS20460	0.88	-0.2
4,433,367	+		RR42_RS20460	0.88	+1.3
4,433,367	+		RR42_RS20460	0.88	-0.3
4,433,368	-		RR42_RS20460	0.88	-2.1
4,433,368	-		RR42_RS20460	0.88	+0.7
4,433,368	-		RR42_RS20460	0.88	-0.1
4,433,368	-		RR42_RS20460	0.88	+1.7
4,433,368	-		RR42_RS20460	0.88	-0.2
4,433,434	+				-0.3
4,433,434	+				+0.3
4,433,435	-				-0.2
4,433,435	-				+0.0
4,433,469	+				+0.7
4,433,470	-				+0.9
4,433,541	+				-0.3
4,433,541	+				-1.0
4,433,541	+				-2.5
4,433,542	-				-0.1
4,434,623	-				-0.1
4,434,623	-				-0.4
4,434,628	-				+1.7
4,434,628	-				-0.9
4,434,667	+				+0.4
4,434,667	+				-0.2
4,434,667	+				+0.7
4,434,667	+				+1.1
4,434,667	+				-0.3
4,434,667	+				+1.7
4,434,668	-				-0.1
4,434,668	-				+0.1
4,434,668	-				-0.1
4,434,668	-				+1.3
4,434,668	-				+0.4
4,434,668	-				+0.2
4,434,668	-				+0.8
4,434,671	+				+0.3
4,434,671	+				+0.9
4,434,671	+				-0.8
4,434,671	+				-1.7
4,434,671	+				-0.2
4,434,672	-				+0.5
4,434,672	-				-1.1
4,434,672	-				-2.4
4,434,742	+		RR42_RS20470	0.15	+0.9
4,435,244	+				-1.1
4,435,245	-				-0.2
4,435,245	-				-0.7
4,435,245	-				+0.4
4,435,245	-				-0.7
4,435,245	-				+0.5
4,435,245	-				+2.1
4,435,245	-				-1.4
4,435,355	+				+0.5
4,435,356	-				-0.5
4,435,358	-				+0.7
4,435,392	+				-0.6
4,435,453	+				-0.6
4,435,454	-				+1.1
4,435,454	-				+0.6
4,435,454	-				+0.9
4,435,454	-				+0.7
4,435,454	-				+1.4
4,435,454	-				+0.8
4,435,469	+		RR42_RS20475	0.11	+0.2
4,435,469	+		RR42_RS20475	0.11	+0.1
4,435,470	-		RR42_RS20475	0.11	-0.8
4,435,470	-		RR42_RS20475	0.11	+0.2