Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20010

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,321,587	+				+1.4
4,321,587	+				+0.1
4,321,587	+				+0.2
4,321,620	+				-2.3
4,321,688	+		RR42_RS20000	0.12	-2.2
4,321,689	-		RR42_RS20000	0.12	+0.6
4,321,721	+		RR42_RS20000	0.18	+0.1
4,321,790	+		RR42_RS20000	0.33	-0.3
4,321,791	-		RR42_RS20000	0.33	-0.2
4,321,791	-		RR42_RS20000	0.33	+0.1
4,322,103	+				+0.3
4,322,226	+		RR42_RS20005	0.13	-0.3
4,322,397	+		RR42_RS20005	0.64	+0.7
4,322,398	-		RR42_RS20005	0.64	-1.6
4,322,544	+				-1.2
4,322,544	+				-1.2
4,322,566	+				+1.1
4,322,599	+				+1.7
4,322,599	+				-0.5
4,322,661	+		RR42_RS20010	0.26	-1.7
4,322,690	-		RR42_RS20010	0.34	-0.2
4,323,059	+				-1.0
4,323,059	+				-0.2
4,323,060	-				+0.2
4,323,094	-				-0.1
4,323,324	-				-3.6
4,323,324	-				+1.8
4,323,556	-				+0.8
4,323,625	+				-0.5
4,323,626	-				+0.1
4,323,651	-				-0.3
4,323,775	-				+2.5
4,323,818	-				+0.1
4,323,818	-				+0.8
4,323,818	-				+1.9
4,323,818	-				+0.4
4,323,924	+				-1.6