Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19110

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,140,575	+		RR42_RS19105	0.53	-0.3
4,140,575	+		RR42_RS19105	0.53	-0.2
4,140,633	+		RR42_RS19105	0.58	-0.6
4,140,633	+		RR42_RS19105	0.58	-0.1
4,140,634	-		RR42_RS19105	0.58	-0.9
4,140,634	-		RR42_RS19105	0.58	+0.3
4,140,767	+		RR42_RS19105	0.69	+0.3
4,140,767	+		RR42_RS19105	0.69	-0.1
4,140,767	+		RR42_RS19105	0.69	+0.5
4,140,767	+		RR42_RS19105	0.69	-0.6
4,140,767	+		RR42_RS19105	0.69	+0.3
4,140,767	+		RR42_RS19105	0.69	-2.1
4,140,767	+		RR42_RS19105	0.69	-0.4
4,140,767	+		RR42_RS19105	0.69	+0.2
4,140,768	-		RR42_RS19105	0.69	+1.9
4,140,768	-		RR42_RS19105	0.69	-0.1
4,140,768	-		RR42_RS19105	0.69	+0.5
4,140,768	-		RR42_RS19105	0.69	-0.2
4,140,768	-		RR42_RS19105	0.69	-0.4
4,140,768	-		RR42_RS19105	0.69	+0.8
4,140,768	-		RR42_RS19105	0.69	+0.6
4,140,769	+		RR42_RS19105	0.69	-0.5
4,140,770	-		RR42_RS19105	0.69	-1.6
4,140,770	-		RR42_RS19105	0.69	+0.3
4,140,808	+		RR42_RS19105	0.72	-1.3
4,140,808	+		RR42_RS19105	0.72	+0.3
4,140,808	+		RR42_RS19105	0.72	+1.2
4,140,808	+		RR42_RS19105	0.72	+0.8
4,140,808	+		RR42_RS19105	0.72	-0.9
4,140,809	-		RR42_RS19105	0.72	+0.1
4,141,131	+				+0.6
4,141,132	-				-0.5
4,141,164	-				-0.3
4,141,195	+				-0.7
4,141,204	+				+2.6
4,141,204	+				+1.1
4,141,204	+				+0.1
4,141,205	-				+1.1
4,141,205	-				-0.9
4,141,205	-				+0.1
4,141,205	-				+1.6
4,141,205	-				-0.1
4,141,215	+				+1.2
4,141,216	-				-0.7
4,141,216	-				+0.3
4,143,182	-				+0.3
4,143,230	-				-0.5
4,143,230	-				-0.9
4,143,230	-				+0.5
4,143,267	-				+0.1
4,143,273	-				-0.2
4,143,381	-		RR42_RS19115	0.32	-1.4
4,143,419	+		RR42_RS19115	0.43	-1.0
4,143,420	-		RR42_RS19115	0.43	+0.4
4,143,489	-		RR42_RS19115	0.63	+0.2
4,143,489	-		RR42_RS19115	0.63	-1.4
4,143,697	+				+3.2
4,143,697	+				-1.2
4,143,698	-				-0.5
4,143,698	-				-0.8
4,143,698	-				-1.4
4,143,713	+				+1.3
4,143,714	-				-2.1
4,143,714	-				-0.4
4,143,714	-				-1.6