Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18605

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,027,661	+				+0.1
4,027,662	-				-0.6
4,027,662	-				+0.1
4,027,662	-				+0.4
4,027,662	-				-2.2
4,027,662	-				+1.2
4,027,662	-				-1.4
4,027,850	-				-0.6
4,027,930	+		RR42_RS18600	0.19	-0.4
4,027,930	+		RR42_RS18600	0.19	+1.1
4,027,937	-		RR42_RS18600	0.19	-0.7
4,027,977	+		RR42_RS18600	0.24	+1.2
4,027,987	+		RR42_RS18600	0.25	-1.8
4,028,021	+		RR42_RS18600	0.29	-0.9
4,028,143	+		RR42_RS18600	0.42	+0.1
4,028,143	+		RR42_RS18600	0.42	+0.2
4,028,144	-		RR42_RS18600	0.42	+0.5
4,028,144	-		RR42_RS18600	0.42	+3.6
4,028,186	+		RR42_RS18600	0.47	+0.3
4,028,186	+		RR42_RS18600	0.47	+0.6
4,028,187	-		RR42_RS18600	0.47	-1.0
4,028,203	+		RR42_RS18600	0.49	-0.6
4,028,204	-		RR42_RS18600	0.49	+1.1
4,028,244	+		RR42_RS18600	0.54	-1.1
4,028,329	+		RR42_RS18600	0.63	-0.4
4,028,330	-		RR42_RS18600	0.63	+0.3
4,028,464	+		RR42_RS18600	0.78	+1.5
4,028,464	+		RR42_RS18600	0.78	+0.5
4,028,465	-		RR42_RS18600	0.78	+1.6
4,028,465	-		RR42_RS18600	0.78	+1.9
4,028,465	-		RR42_RS18600	0.78	-0.1
4,028,465	-		RR42_RS18600	0.78	+0.6
4,028,465	-		RR42_RS18600	0.78	+1.1
4,028,709	+				+0.1
4,028,709	+				+1.4
4,028,710	-				+1.0
4,028,710	-				-0.6
4,028,745	+				+0.6
4,028,746	-				-0.4
4,028,746	-				-0.1
4,028,790	+		RR42_RS18605	0.15	+0.6
4,028,791	-		RR42_RS18605	0.15	-0.7
4,028,930	+		RR42_RS18605	0.31	+0.3
4,028,991	+		RR42_RS18605	0.38	+1.8
4,029,348	+		RR42_RS18605	0.78	+2.5
4,029,348	+		RR42_RS18605	0.78	-0.7
4,029,429	+		RR42_RS18605	0.87	+0.2
4,029,489	+				-0.9
4,029,490	-				-0.3
4,029,490	-				-0.8
4,029,490	-				+0.2
4,029,508	-				+1.1
4,029,510	+				-2.3
4,029,510	+				-1.7
4,029,510	+				-0.5
4,029,510	+				-0.5
4,029,511	-				+4.2
4,029,511	-				+1.4
4,029,511	-				+0.4
4,029,511	-				-0.9
4,029,587	-				-0.4
4,029,600	-				-1.7
4,029,736	+		RR42_RS18610	0.27	+1.3
4,029,737	-		RR42_RS18610	0.28	-1.5
4,029,777	+		RR42_RS18610	0.45	-0.5
4,029,778	-		RR42_RS18610	0.46	-0.4
4,030,091	+		RR42_RS18615	0.27	-0.2
4,030,355	+		RR42_RS18615	0.80	+0.2
4,030,356	-		RR42_RS18615	0.80	-0.2
4,030,370	+		RR42_RS18615	0.83	-0.7
4,030,371	-		RR42_RS18615	0.83	+0.1
4,030,371	-		RR42_RS18615	0.83	-0.5
4,030,371	-		RR42_RS18615	0.83	+0.1
4,030,385	+		RR42_RS18615	0.86	+0.2
4,030,510	+				+0.1
4,030,510	+				-0.1
4,030,510	+				+0.8
4,030,510	+				+0.2
4,030,511	-				+0.4
4,030,511	-				+0.2
4,030,511	-				-0.6