Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18550

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
4,013,026	+		RR42_RS18545	0.15	+1.1
4,013,056	+		RR42_RS18545	0.18	+1.3
4,013,446	+		RR42_RS18545	0.60	+3.0
4,013,446	+		RR42_RS18545	0.60	+0.2
4,013,447	-		RR42_RS18545	0.60	-0.8
4,013,447	-		RR42_RS18545	0.60	-0.6
4,013,447	-		RR42_RS18545	0.60	-0.3
4,014,127	+		RR42_RS18550	0.16	-1.6
4,014,128	-		RR42_RS18550	0.16	-0.3
4,014,171	-		RR42_RS18550	0.21	-0.2
4,014,436	-		RR42_RS18550	0.49	-2.2
4,014,554	+		RR42_RS18550	0.62	+0.9
4,014,698	+		RR42_RS18550	0.77	+0.0
4,014,782	+		RR42_RS18550	0.86	-1.3
4,014,782	+		RR42_RS18550	0.86	-0.6
4,014,782	+		RR42_RS18550	0.86	-1.3
4,014,783	-		RR42_RS18550	0.86	+0.2
4,014,783	-		RR42_RS18550	0.86	+0.0
4,014,783	-		RR42_RS18550	0.86	-0.7
4,014,783	-		RR42_RS18550	0.86	-1.7
4,014,783	-		RR42_RS18550	0.86	-0.7
4,014,918	-				-0.1
4,014,985	+				+0.2
4,015,019	+				-0.2
4,015,023	-				-0.3
4,015,072	+				+1.0
4,015,163	+		RR42_RS18555	0.18	+0.1
4,015,163	+		RR42_RS18555	0.18	+0.6
4,015,299	-		RR42_RS18555	0.44	+0.3
4,015,299	-		RR42_RS18555	0.44	+0.8
4,015,514	+		RR42_RS18555	0.84	-0.3
4,015,514	+		RR42_RS18555	0.84	-1.6
4,015,514	+		RR42_RS18555	0.84	-0.5
4,015,514	+		RR42_RS18555	0.84	-0.3
4,015,515	-		RR42_RS18555	0.84	+0.8
4,015,515	-		RR42_RS18555	0.84	-0.5