Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18380

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,983,137	-				+0.2
3,983,162	+				-0.1
3,983,162	+				+1.0
3,983,162	+				-0.7
3,983,163	-				+0.3
3,983,163	-				-0.7
3,983,163	-				-0.2
3,983,313	-		RR42_RS18375	0.18	-0.4
3,983,438	+		RR42_RS18375	0.36	-0.9
3,983,438	+		RR42_RS18375	0.36	+0.4
3,983,439	-		RR42_RS18375	0.36	+0.0
3,983,439	-		RR42_RS18375	0.36	+0.0
3,983,439	-		RR42_RS18375	0.36	+1.0
3,983,439	-		RR42_RS18375	0.36	-0.7
3,983,439	-		RR42_RS18375	0.36	+0.4
3,983,439	-		RR42_RS18375	0.36	-0.7
3,983,471	+		RR42_RS18375	0.40	+0.4
3,983,472	-		RR42_RS18375	0.41	-1.5
3,983,614	+		RR42_RS18375	0.61	+1.4
3,983,618	+		RR42_RS18375	0.61	-0.8
3,983,618	+		RR42_RS18375	0.61	-0.3
3,983,619	-		RR42_RS18375	0.61	-0.1
3,983,619	-		RR42_RS18375	0.61	-0.9
3,983,619	-		RR42_RS18375	0.61	-0.7
3,983,619	-		RR42_RS18375	0.61	+0.5
3,983,679	+		RR42_RS18375	0.70	+0.7
3,983,680	-		RR42_RS18375	0.70	+1.4
3,983,680	-		RR42_RS18375	0.70	-0.7
3,983,749	+		RR42_RS18375	0.79	-0.3
3,983,749	+		RR42_RS18375	0.79	+0.1
3,983,749	+		RR42_RS18375	0.79	+0.1
3,983,750	-		RR42_RS18375	0.80	+1.2
3,983,750	-		RR42_RS18375	0.80	-0.4
3,983,750	-		RR42_RS18375	0.80	-1.5
3,983,750	-		RR42_RS18375	0.80	+0.5
3,983,750	-		RR42_RS18375	0.80	-0.3
3,983,750	-		RR42_RS18375	0.80	-0.1
3,983,750	-		RR42_RS18375	0.80	+0.1
3,983,797	+		RR42_RS18375	0.86	-0.5
3,983,858	+				-0.3
3,983,858	+				+0.4
3,983,859	-				+0.4
3,983,952	-				+2.6
3,984,043	-				-1.3
3,984,097	+				-1.0
3,984,172	+		RR42_RS18380	0.19	+0.2
3,984,316	+		RR42_RS18380	0.78	+1.8
3,984,337	+		RR42_RS18380	0.86	+2.4
3,984,337	+		RR42_RS18380	0.86	+0.8
3,984,338	-		RR42_RS18380	0.87	-0.1
3,984,371	+				+2.9
3,984,372	-				-0.3
3,984,372	-				+0.4
3,984,372	-				-0.2
3,984,449	+				+2.4
3,984,449	+				+1.9
3,984,450	-				-0.4
3,984,561	+		RR42_RS18385	0.24	+2.0
3,984,607	+		RR42_RS18385	0.34	+0.6
3,984,765	+		RR42_RS18385	0.69	+1.0
3,984,808	+				-1.7
3,984,808	+				+1.2
3,984,809	-				-0.5
3,984,815	+				+2.7
3,984,816	-				+0.2
3,984,816	-				-1.9
3,984,816	-				+1.3
3,984,818	+				+1.1
3,984,818	+				+0.1
3,984,878	-				-1.3
3,984,878	-				+0.2
3,985,032	+		RR42_RS18390	0.79	+2.6
3,985,032	+		RR42_RS18390	0.79	+0.8
3,985,051	+		RR42_RS18390	0.86	+1.5
3,985,051	+		RR42_RS18390	0.86	-0.4
3,985,051	+		RR42_RS18390	0.86	+2.5
3,985,051	+		RR42_RS18390	0.86	+1.0
3,985,052	-		RR42_RS18390	0.87	+0.4
3,985,052	-		RR42_RS18390	0.87	+0.4
3,985,064	+				-0.4
3,985,233	+		RR42_RS18395	0.13	+0.1
3,985,234	-		RR42_RS18395	0.14	-0.5
3,985,234	-		RR42_RS18395	0.14	-0.7
3,985,234	-		RR42_RS18395	0.14	+0.3
3,985,328	+		RR42_RS18395	0.44	+0.7
3,985,328	+		RR42_RS18395	0.44	-0.2