Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18185

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,939,125	+		RR42_RS18180	0.79	-0.5
3,939,125	+		RR42_RS18180	0.79	+0.1
3,939,125	+		RR42_RS18180	0.79	+0.2
3,939,125	+		RR42_RS18180	0.79	-0.4
3,939,125	+		RR42_RS18180	0.79	-0.1
3,939,125	+		RR42_RS18180	0.79	-0.4
3,939,125	+		RR42_RS18180	0.79	+0.7
3,939,126	-		RR42_RS18180	0.79	-0.4
3,939,126	-		RR42_RS18180	0.79	+0.4
3,939,126	-		RR42_RS18180	0.79	-0.3
3,939,129	+		RR42_RS18180	0.79	+0.1
3,939,129	+		RR42_RS18180	0.79	+0.6
3,939,129	+		RR42_RS18180	0.79	-0.4
3,939,129	+		RR42_RS18180	0.79	-0.9
3,939,129	+		RR42_RS18180	0.79	-0.4
3,939,130	-		RR42_RS18180	0.79	-0.5
3,939,132	-		RR42_RS18180	0.79	+0.8
3,939,132	-		RR42_RS18180	0.79	-0.4
3,939,132	-		RR42_RS18180	0.79	-0.8
3,939,132	-		RR42_RS18180	0.79	+0.9
3,939,251	+		RR42_RS18180	0.84	-0.8
3,939,251	+		RR42_RS18180	0.84	-0.1
3,939,252	-		RR42_RS18180	0.85	+0.0
3,939,252	-		RR42_RS18180	0.85	-0.6
3,939,252	-		RR42_RS18180	0.85	+2.0
3,939,252	-		RR42_RS18180	0.85	+0.8
3,939,257	+		RR42_RS18180	0.85	-0.0
3,939,258	-		RR42_RS18180	0.85	-0.9
3,939,407	+				-1.1
3,939,408	-				-0.8
3,939,408	-				-0.1
3,939,408	-				-0.1
3,939,529	-				+0.1
3,939,701	-				+0.1
3,939,723	+				+0.3
3,939,723	+				-0.9
3,939,724	-				+0.3
3,939,724	-				+0.0
3,939,724	-				-0.4
3,939,724	-				-0.5
3,939,765	+				+1.0
3,939,779	-				-0.1
3,939,779	-				+1.6
3,939,786	+				-0.4
3,939,787	-				+0.3
3,939,787	-				+0.4
3,939,787	-				-0.4
3,939,787	-				-0.9
3,939,792	-				-0.3
3,940,003	+				+1.1
3,940,004	-				-0.4
3,940,051	-		RR42_RS18185	0.14	+0.1
3,940,082	+		RR42_RS18185	0.16	-0.1
3,940,082	+		RR42_RS18185	0.16	+0.7
3,940,083	-		RR42_RS18185	0.16	-1.1
3,940,083	-		RR42_RS18185	0.16	-0.2
3,940,092	-		RR42_RS18185	0.17	+0.8
3,940,115	+		RR42_RS18185	0.19	-0.4
3,940,115	+		RR42_RS18185	0.19	-0.8
3,940,115	+		RR42_RS18185	0.19	+0.2
3,940,180	+		RR42_RS18185	0.25	-1.1
3,940,337	+		RR42_RS18185	0.38	+2.0
3,940,430	+		RR42_RS18185	0.46	-0.3
3,940,446	-		RR42_RS18185	0.48	+0.3
3,940,537	+		RR42_RS18185	0.55	-0.2
3,940,537	+		RR42_RS18185	0.55	-0.8
3,940,538	-		RR42_RS18185	0.55	+0.4
3,940,540	+		RR42_RS18185	0.56	+0.3
3,940,540	+		RR42_RS18185	0.56	+1.0
3,940,541	-		RR42_RS18185	0.56	-1.1
3,940,541	-		RR42_RS18185	0.56	-1.3
3,940,541	-		RR42_RS18185	0.56	+0.6
3,940,673	+		RR42_RS18185	0.67	-1.5
3,940,673	+		RR42_RS18185	0.67	-0.9
3,940,673	+		RR42_RS18185	0.67	-0.0
3,940,673	+		RR42_RS18185	0.67	-0.5
3,940,674	-		RR42_RS18185	0.67	-0.6
3,940,674	-		RR42_RS18185	0.67	-0.4
3,940,675	+		RR42_RS18185	0.67	-0.4
3,940,841	+		RR42_RS18185	0.81	+0.3
3,940,971	-				-0.5
3,941,115	+				-0.4
3,941,115	+				-0.4
3,941,334	+		RR42_RS18190	0.21	+0.1
3,941,335	-		RR42_RS18190	0.21	+1.6
3,941,397	+		RR42_RS18190	0.27	+0.6
3,941,397	+		RR42_RS18190	0.27	+1.0
3,941,398	-		RR42_RS18190	0.27	-0.2
3,941,398	-		RR42_RS18190	0.27	+0.9
3,941,398	-		RR42_RS18190	0.27	+0.8
3,941,460	+		RR42_RS18190	0.32	-0.9
3,941,460	+		RR42_RS18190	0.32	-0.6
3,941,461	-		RR42_RS18190	0.33	-0.6
3,941,461	-		RR42_RS18190	0.33	-0.1
3,941,685	+		RR42_RS18190	0.54	-0.8
3,941,686	-		RR42_RS18190	0.54	-1.1
3,941,779	-		RR42_RS18190	0.62	-0.8