Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17805

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,850,938	+		RR42_RS17800	0.33	+3.5
3,850,993	+		RR42_RS17800	0.37	+0.2
3,851,007	+		RR42_RS17800	0.38	+0.1
3,851,007	+		RR42_RS17800	0.38	-0.8
3,851,007	+		RR42_RS17800	0.38	-0.5
3,851,007	+		RR42_RS17800	0.38	+2.3
3,851,008	-		RR42_RS17800	0.38	-1.2
3,851,008	-		RR42_RS17800	0.38	+0.5
3,851,009	+		RR42_RS17800	0.38	+2.5
3,851,009	+		RR42_RS17800	0.38	-1.3
3,851,010	-		RR42_RS17800	0.38	-0.0
3,851,334	+		RR42_RS17800	0.61	-1.7
3,851,427	+		RR42_RS17800	0.68	-0.7
3,851,428	-		RR42_RS17800	0.68	-1.5
3,851,523	+		RR42_RS17800	0.75	+0.2
3,851,523	+		RR42_RS17800	0.75	+1.0
3,851,524	-		RR42_RS17800	0.75	-0.5
3,851,757	+				-0.0
3,851,757	+				-1.2
3,851,758	-				-0.8
3,851,758	-				-0.8
3,851,758	-				+0.7
3,851,758	-				-0.7
3,851,758	-				+1.5
3,851,758	-				-0.7
3,851,758	-				+1.0
3,851,773	-				+0.2
3,851,773	-				-0.4
3,851,798	+				-0.1
3,851,878	-				-1.8
3,851,941	-		RR42_RS17805	0.17	-1.5
3,852,168	+				+0.2
3,852,168	+				-0.3
3,852,169	-				-0.6
3,852,183	+				+1.5
3,852,183	+				-0.4
3,852,184	-				+1.7
3,852,184	-				-1.4
3,852,246	+				-1.0
3,852,246	+				+0.4
3,852,246	+				+1.0
3,852,247	-				+1.1
3,852,247	-				-0.1
3,852,343	+				-0.8
3,852,343	+				-0.7
3,852,343	+				-1.5
3,852,343	+				+0.4
3,852,343	+				-1.1
3,852,344	-				+0.6
3,852,344	-				+0.8
3,852,362	-				-0.8
3,852,373	+		RR42_RS17810	0.12	+0.3
3,852,373	+		RR42_RS17810	0.12	+0.5
3,852,374	-		RR42_RS17810	0.12	-0.4
3,852,374	-		RR42_RS17810	0.12	-0.0
3,852,374	-		RR42_RS17810	0.12	-0.5
3,852,374	-		RR42_RS17810	0.12	-0.2
3,852,469	+		RR42_RS17810	0.36	-1.0
3,852,598	+		RR42_RS17810	0.67	+0.5
3,852,599	-		RR42_RS17810	0.67	-1.1
3,852,731	+				-0.3
3,852,731	+				+0.7
3,852,731	+				-0.6
3,852,731	+				-1.0
3,852,731	+				-0.2
3,852,731	+				+0.2
3,852,732	-				+1.1
3,852,732	-				-1.4
3,852,732	-				-0.2
3,852,732	-				-0.8
3,852,744	+				-0.7
3,852,744	+				+0.6
3,852,744	+				+0.5
3,852,744	+				-1.5
3,852,805	+				+0.2
3,852,806	-				+1.2
3,852,806	-				+0.5
3,852,806	-				+0.3
3,852,806	-				+0.2
3,852,840	+				+2.5
3,852,840	+				+0.2
3,852,865	+				+1.4
3,852,866	-				-0.0
3,852,866	-				-1.7
3,852,866	-				+0.3
3,852,867	+				+2.5
3,852,867	+				-0.3
3,852,867	+				+0.3
3,852,867	+				+1.5
3,852,875	+				+2.1
3,852,890	+				-0.8
3,852,890	+				+0.2
3,852,890	+				+1.5
3,852,960	+				-0.2
3,852,961	-				-0.2
3,852,974	-				+0.4
3,853,018	-				-0.3
3,853,064	+				-0.6
3,853,110	+		RR42_RS17815	0.12	-0.3
3,853,111	-		RR42_RS17815	0.12	-1.2
3,853,111	-		RR42_RS17815	0.12	+0.5