Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17775

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,844,847	+		RR42_RS17770	0.62	-0.8
3,844,847	+		RR42_RS17770	0.62	+0.7
3,844,848	-		RR42_RS17770	0.62	-0.5
3,844,913	+		RR42_RS17770	0.64	-0.1
3,844,913	+		RR42_RS17770	0.64	-0.6
3,844,913	+		RR42_RS17770	0.64	-0.9
3,844,913	+		RR42_RS17770	0.64	-1.5
3,844,913	+		RR42_RS17770	0.64	+1.6
3,844,913	+		RR42_RS17770	0.64	+1.7
3,845,049	-		RR42_RS17770	0.71	-1.3
3,845,051	+		RR42_RS17770	0.71	-0.5
3,845,051	+		RR42_RS17770	0.71	-0.7
3,845,051	+		RR42_RS17770	0.71	-0.8
3,845,052	-		RR42_RS17770	0.71	+0.0
3,845,052	-		RR42_RS17770	0.71	-2.7
3,845,052	-		RR42_RS17770	0.71	-0.9
3,845,052	-		RR42_RS17770	0.71	+1.0
3,845,052	-		RR42_RS17770	0.71	-0.5
3,845,060	+		RR42_RS17770	0.71	-0.3
3,845,144	+		RR42_RS17770	0.75	-1.3
3,845,252	+		RR42_RS17770	0.80	-1.5
3,845,252	+		RR42_RS17770	0.80	-0.2
3,845,253	-		RR42_RS17770	0.80	+0.0
3,845,339	+		RR42_RS17770	0.84	+0.2
3,845,339	+		RR42_RS17770	0.84	-1.3
3,845,340	-		RR42_RS17770	0.84	-0.3
3,845,345	+		RR42_RS17770	0.84	+0.1
3,845,345	+		RR42_RS17770	0.84	+0.9
3,845,345	+		RR42_RS17770	0.84	-0.9
3,845,346	-		RR42_RS17770	0.84	+2.2
3,845,346	-		RR42_RS17770	0.84	-0.0
3,845,346	-		RR42_RS17770	0.84	+1.5
3,845,441	+		RR42_RS17770	0.88	-0.4
3,845,483	+		RR42_RS17770	0.90	-0.8
3,845,483	+		RR42_RS17770	0.90	+0.5
3,845,483	+		RR42_RS17770	0.90	+0.4
3,845,483	+		RR42_RS17770	0.90	+0.6
3,845,484	-				+0.5
3,845,484	-				-0.0
3,845,484	-				+0.3
3,845,484	-				+0.4
3,845,484	-				+0.5
3,845,484	-				+1.0
3,845,485	+				-0.8
3,845,485	+				+1.3
3,845,485	+				-0.6
3,845,485	+				-0.2
3,845,485	+				+1.1
3,845,485	+				-1.8
3,845,485	+				+0.3
3,845,486	-				+0.1
3,845,486	-				+0.5
3,845,486	-				-0.6
3,845,535	-				+0.5
3,845,535	-				-0.7
3,845,562	-				+1.1
3,845,562	-				+0.1
3,845,618	+				-0.1
3,845,621	+				-0.5
3,845,621	+				-0.5
3,845,621	+				-0.3
3,845,622	-				-1.6
3,845,696	+				+0.7
3,845,696	+				+0.2
3,845,697	-				-0.2
3,845,701	+				-2.5
3,845,701	+				-2.9
3,845,702	-				+0.2
3,845,702	-				+0.5
3,845,705	+				-0.7
3,845,705	+				-1.6
3,845,705	+				+0.0
3,845,706	-				-0.0
3,845,706	-				-0.5
3,845,706	-				+1.5
3,845,706	-				-0.6
3,845,716	-				+0.3
3,845,815	+				-0.6
3,845,816	-				-0.7
3,846,057	+		RR42_RS17775	0.38	+0.5
3,846,058	-		RR42_RS17775	0.39	+1.2
3,846,058	-		RR42_RS17775	0.39	-1.3
3,846,210	+		RR42_RS17775	0.61	+0.1
3,846,211	-		RR42_RS17775	0.61	-0.3
3,846,211	-		RR42_RS17775	0.61	+0.1
3,846,211	-		RR42_RS17775	0.61	+0.4
3,846,211	-		RR42_RS17775	0.61	-0.5
3,846,256	-		RR42_RS17775	0.67	-1.2
3,846,256	-		RR42_RS17775	0.67	+2.5
3,846,256	-		RR42_RS17775	0.67	-0.1
3,846,444	+				+0.2
3,846,444	+				-1.0
3,846,444	+				-0.6
3,846,444	+				+1.0
3,846,444	+				-2.1
3,846,445	-				+0.0
3,846,806	+		RR42_RS17780	0.34	+0.2
3,847,023	+		RR42_RS17780	0.58	-0.3
3,847,023	+		RR42_RS17780	0.58	+1.0
3,847,024	-		RR42_RS17780	0.58	-0.4
3,847,024	-		RR42_RS17780	0.58	-0.6
3,847,040	-		RR42_RS17780	0.60	-0.7
3,847,096	+		RR42_RS17780	0.66	+1.5
3,847,096	+		RR42_RS17780	0.66	+1.1
3,847,097	-		RR42_RS17780	0.66	-0.6
3,847,371	+				+0.5
3,847,372	-				-0.1
3,847,438	-				-0.3
3,847,443	-				+3.1
3,847,477	-				+0.5
3,847,477	-				+1.0
3,847,477	-				-1.1
3,847,477	-				-1.9
3,847,477	-				-0.1