Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16675

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,611,797	-		RR42_RS16665	0.64	+1.5
3,611,797	-		RR42_RS16665	0.64	+0.1
3,611,941	-		RR42_RS16665	0.83	-0.3
3,611,941	-		RR42_RS16665	0.83	-1.3
3,611,949	+		RR42_RS16665	0.84	+0.9
3,611,949	+		RR42_RS16665	0.84	-1.4
3,611,950	-		RR42_RS16665	0.84	-0.3
3,611,950	-		RR42_RS16665	0.84	-0.8
3,611,950	-		RR42_RS16665	0.84	+0.9
3,611,950	-		RR42_RS16665	0.84	-0.7
3,611,959	-		RR42_RS16665	0.85	-0.1
3,611,991	+		RR42_RS16665	0.89	-0.0
3,611,991	+		RR42_RS16665	0.89	+0.3
3,611,991	+		RR42_RS16665	0.89	+0.4
3,611,991	+		RR42_RS16665	0.89	-1.3
3,611,991	+		RR42_RS16665	0.89	+0.2
3,611,992	-		RR42_RS16665	0.89	-0.4
3,612,060	+				+1.1
3,612,196	+				+3.0
3,612,197	-				+0.5
3,612,428	+		RR42_RS16670	0.53	+1.2
3,612,429	-		RR42_RS16670	0.53	+0.6
3,612,434	+		RR42_RS16670	0.54	+0.6
3,612,435	-		RR42_RS16670	0.55	+0.6
3,612,435	-		RR42_RS16670	0.55	-0.5
3,612,435	-		RR42_RS16670	0.55	+0.1
3,612,582	-				+1.6
3,612,593	+				+0.5
3,612,640	-				-0.1
3,612,677	+				+0.1
3,612,678	-				+1.9
3,612,712	+				+1.6
3,612,712	+				+0.1
3,612,713	-				+0.5
3,612,713	-				-0.0
3,612,713	-				-1.2
3,612,713	-				-1.5
3,612,713	-				-0.5
3,612,713	-				-0.6
3,612,967	+		RR42_RS16675	0.54	+1.0
3,613,097	+		RR42_RS16675	0.88	+2.1
3,613,163	-				+0.1
3,613,171	-				-0.8
3,613,382	-		RR42_RS16680	0.43	-0.5
3,613,382	-		RR42_RS16680	0.43	+0.2
3,613,494	+		RR42_RS16680	0.74	+0.9
3,613,495	-		RR42_RS16680	0.74	+0.2
3,613,649	+				+0.9
3,613,649	+				-0.4
3,613,649	+				+0.0
3,613,668	+				-0.3
3,613,669	-				+0.5
3,613,833	+		RR42_RS16685	0.51	+0.1
3,613,833	+		RR42_RS16685	0.51	-1.5
3,613,855	+		RR42_RS16685	0.76	+1.1
3,613,876	+				+1.1
3,613,948	+				-1.2
3,614,054	+				+0.4
3,614,055	-				+1.8
3,614,055	-				+2.5
3,614,104	+				+0.3
3,614,105	-				+0.2
3,614,105	-				-0.8