Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16570
Experiment: R2A with Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,590,145 | - | RR42_RS16565 | 0.42 | +0.3 | |
3,590,279 | - | RR42_RS16565 | 0.56 | -1.2 | |
3,590,279 | - | RR42_RS16565 | 0.56 | +1.6 | |
3,590,555 | - | RR42_RS16565 | 0.83 | -0.2 | |
3,590,688 | + | -0.5 | |||
3,590,775 | + | -1.6 | |||
3,590,786 | - | +0.5 | |||
3,590,897 | - | RR42_RS16570 | 0.12 | -0.9 | |
3,590,897 | - | RR42_RS16570 | 0.12 | -1.4 | |
3,591,514 | + | RR42_RS16570 | 0.69 | -1.4 | |
3,591,515 | - | RR42_RS16570 | 0.69 | -1.7 | |
3,592,087 | - | RR42_RS16575 | 0.13 | -0.7 | |
3,592,412 | + | RR42_RS16575 | 0.40 | +0.1 | |
3,592,491 | + | RR42_RS16575 | 0.46 | -0.5 | |
3,592,491 | + | RR42_RS16575 | 0.46 | -0.3 | |
3,592,491 | + | RR42_RS16575 | 0.46 | +1.5 | |
3,592,492 | - | RR42_RS16575 | 0.46 | +2.5 | |
3,592,690 | - | RR42_RS16575 | 0.62 | +0.4 |
Or see this region's nucleotide sequence