Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16245

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,516,009	-				-0.8
3,516,009	-				-0.0
3,516,060	+				+0.5
3,516,060	+				-0.2
3,516,061	-				+0.4
3,516,418	+		RR42_RS16240	0.90	-0.7
3,516,418	+		RR42_RS16240	0.90	+0.9
3,516,614	+				-0.2
3,516,615	-				-0.2
3,516,632	+				+1.8
3,516,633	-				+0.7
3,516,633	-				+0.9
3,516,672	+				-1.5
3,516,673	-				+1.7
3,516,673	-				+1.2
3,516,673	-				-0.3
3,516,930	+		RR42_RS16245	0.36	-0.1
3,516,930	+		RR42_RS16245	0.36	-0.1
3,516,930	+		RR42_RS16245	0.36	+3.3
3,516,930	+		RR42_RS16245	0.36	-0.3
3,516,931	-		RR42_RS16245	0.36	+0.1
3,516,931	-		RR42_RS16245	0.36	+0.1
3,516,931	-		RR42_RS16245	0.36	+0.1
3,516,933	+		RR42_RS16245	0.37	+0.9
3,516,933	+		RR42_RS16245	0.37	+1.2
3,516,944	-		RR42_RS16245	0.38	-0.6
3,517,096	-		RR42_RS16245	0.58	-0.6
3,517,370	-				+0.2
3,517,407	+				-1.5
3,517,456	+				-0.4
3,517,456	+				+0.6
3,517,456	+				+2.1
3,517,460	+				+0.9
3,517,460	+				-0.3
3,517,460	+				+1.5
3,517,461	-				+0.0
3,517,560	-				-1.1
3,517,560	-				-0.3
3,517,724	+		RR42_RS16250	0.20	+0.2
3,517,724	+		RR42_RS16250	0.20	+0.9
3,517,725	-		RR42_RS16250	0.20	+1.2
3,517,725	-		RR42_RS16250	0.20	-1.0
3,517,725	-		RR42_RS16250	0.20	+0.9
3,517,821	+		RR42_RS16250	0.27	+0.0
3,517,821	+		RR42_RS16250	0.27	-0.4
3,517,822	-		RR42_RS16250	0.27	+0.1
3,518,170	-		RR42_RS16250	0.54	-0.5
3,518,201	+		RR42_RS16250	0.56	+0.8
3,518,243	+		RR42_RS16250	0.59	-1.0