Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15770

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,407,601	-		RR42_RS15765	0.20	+0.1
3,407,608	+		RR42_RS15765	0.20	-1.4
3,407,608	+		RR42_RS15765	0.20	-1.5
3,407,609	-		RR42_RS15765	0.20	+0.1
3,407,609	-		RR42_RS15765	0.20	+0.6
3,407,609	-		RR42_RS15765	0.20	+0.5
3,407,609	-		RR42_RS15765	0.20	+0.6
3,407,644	-		RR42_RS15765	0.24	+0.8
3,407,741	-		RR42_RS15765	0.35	-0.4
3,407,741	-		RR42_RS15765	0.35	+0.8
3,407,754	-		RR42_RS15765	0.36	-0.4
3,407,786	-		RR42_RS15765	0.39	-2.2
3,407,880	-		RR42_RS15765	0.49	-1.3
3,407,882	-		RR42_RS15765	0.50	-0.1
3,407,951	+		RR42_RS15765	0.57	-1.0
3,407,959	+		RR42_RS15765	0.58	+0.1
3,408,297	+				-2.5
3,408,304	+				-3.0
3,408,390	+				-2.4
3,408,390	+				-1.5
3,408,390	+				-2.1
3,408,391	-				-0.6
3,408,433	-				-1.3
3,408,645	+		RR42_RS15770	0.16	-0.4
3,408,645	+		RR42_RS15770	0.16	-1.5
3,408,681	+		RR42_RS15770	0.19	-1.9
3,408,681	+		RR42_RS15770	0.19	+0.4
3,408,708	+		RR42_RS15770	0.20	-2.2
3,408,990	+		RR42_RS15770	0.38	-1.4
3,408,990	+		RR42_RS15770	0.38	-1.8
3,409,239	+		RR42_RS15770	0.54	-0.9
3,409,335	+		RR42_RS15770	0.61	-0.1
3,409,335	+		RR42_RS15770	0.61	+0.3
3,409,417	+		RR42_RS15770	0.66	-1.4
3,409,798	+				-1.0
3,409,818	+				-1.6
3,409,818	+				-1.6
3,409,818	+				-2.3
3,409,819	-				-2.5
3,409,848	-				+0.4
3,409,896	+				-1.0
3,409,897	-				-0.6
3,409,927	-				-2.0
3,409,927	-				-1.5
3,409,927	-				-2.0
3,409,954	-				-0.6
3,409,954	-				-1.3
3,409,954	-				-0.8
3,409,957	-				-2.9
3,409,957	-				+0.5
3,409,957	-				+0.2
3,409,959	+				-1.3
3,409,959	+				-1.4
3,409,959	+				-1.5
3,409,959	+				-1.5
3,409,959	+				-2.4
3,409,960	-				+1.3
3,409,960	-				+0.2
3,409,960	-				-0.3
3,409,960	-				-2.1
3,410,207	-		RR42_RS15775	0.21	-2.1
3,410,207	-		RR42_RS15775	0.21	-0.1
3,410,387	+		RR42_RS15775	0.38	-0.6
3,410,387	+		RR42_RS15775	0.38	-3.2
3,410,388	-		RR42_RS15775	0.38	-3.2
3,410,475	+		RR42_RS15775	0.46	-2.0
3,410,478	-		RR42_RS15775	0.47	-2.3
3,410,621	+		RR42_RS15775	0.60	-1.0
3,410,708	+		RR42_RS15775	0.68	-3.3
3,410,709	-		RR42_RS15775	0.69	-0.5
3,410,785	+		RR42_RS15775	0.76	-2.0
3,410,881	+		RR42_RS15775	0.85	+0.8
3,410,882	-		RR42_RS15775	0.85	-2.5