Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15745

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,402,040	+		RR42_RS15735	0.79	+0.3
3,402,040	+		RR42_RS15735	0.79	-1.4
3,402,041	-		RR42_RS15735	0.79	-0.8
3,402,126	-		RR42_RS15735	0.87	-1.1
3,402,126	-		RR42_RS15735	0.87	-0.7
3,402,269	-				-1.1
3,402,269	-				+0.4
3,402,280	+				-1.1
3,402,281	-				-1.4
3,402,281	-				+0.6
3,402,299	-				+0.1
3,402,312	-				-0.7
3,402,478	+				-0.2
3,402,586	-		RR42_RS15740	0.20	+1.1
3,402,630	-		RR42_RS15740	0.29	-2.7
3,402,714	+		RR42_RS15740	0.47	-1.7
3,402,929	-				+0.1
3,403,004	-				+0.3
3,403,004	-				-1.1
3,403,011	-				-0.0
3,403,019	+				-1.4
3,403,019	+				-1.7
3,403,019	+				+0.8
3,403,019	+				-1.8
3,403,020	-				-0.3
3,403,020	-				+0.2
3,403,020	-				-1.2
3,403,020	-				+2.4
3,403,121	+				-0.2
3,403,192	+		RR42_RS15745	0.13	-0.7
3,403,282	+		RR42_RS15745	0.20	-0.8
3,403,283	-		RR42_RS15745	0.21	-0.9
3,403,321	+		RR42_RS15745	0.24	-0.7
3,403,345	+		RR42_RS15745	0.26	-0.6
3,403,351	+		RR42_RS15745	0.26	-1.5
3,403,351	+		RR42_RS15745	0.26	-1.4
3,403,351	+		RR42_RS15745	0.26	+1.3
3,403,351	+		RR42_RS15745	0.26	-1.9
3,403,552	+		RR42_RS15745	0.42	-0.8
3,403,714	+		RR42_RS15745	0.55	-0.9
3,403,906	+		RR42_RS15745	0.71	-2.4
3,403,906	+		RR42_RS15745	0.71	-1.7
3,403,915	+		RR42_RS15745	0.72	+0.4
3,404,099	+		RR42_RS15745	0.87	-2.5
3,404,099	+		RR42_RS15745	0.87	-0.7
3,404,099	+		RR42_RS15745	0.87	+0.1
3,404,101	+		RR42_RS15745	0.87	-0.4
3,404,239	+				-2.1
3,404,279	-				-0.8
3,404,340	+				+0.8
3,404,340	+				-0.4
3,404,344	+				-0.8
3,404,344	+				-1.8
3,404,344	+				-1.7
3,404,362	-				+0.1
3,404,369	+				+0.4
3,404,399	+		RR42_RS15750	0.11	+0.3
3,404,460	+		RR42_RS15750	0.16	-1.5
3,404,520	+		RR42_RS15750	0.21	-0.3
3,404,529	+		RR42_RS15750	0.22	+1.3
3,404,529	+		RR42_RS15750	0.22	-0.3
3,404,566	+		RR42_RS15750	0.25	-1.2
3,404,566	+		RR42_RS15750	0.25	-0.1
3,404,816	+		RR42_RS15750	0.46	+0.6
3,404,946	+		RR42_RS15750	0.57	-0.4
3,405,076	+		RR42_RS15750	0.67	-0.6