Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15620

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,374,129	+		RR42_RS15615	0.32	+0.7
3,374,129	+		RR42_RS15615	0.32	-0.9
3,374,130	-		RR42_RS15615	0.32	-0.5
3,374,130	-		RR42_RS15615	0.32	+0.6
3,374,308	+		RR42_RS15615	0.51	+1.2
3,374,309	-		RR42_RS15615	0.51	-1.2
3,374,309	-		RR42_RS15615	0.51	-0.4
3,374,311	+		RR42_RS15615	0.52	+0.5
3,374,312	-		RR42_RS15615	0.52	-0.2
3,374,312	-		RR42_RS15615	0.52	+1.5
3,374,329	+		RR42_RS15615	0.54	-0.3
3,374,329	+		RR42_RS15615	0.54	+0.4
3,374,330	-		RR42_RS15615	0.54	+1.4
3,374,330	-		RR42_RS15615	0.54	-0.3
3,374,330	-		RR42_RS15615	0.54	-0.4
3,374,447	-		RR42_RS15615	0.66	-0.6
3,374,648	-		RR42_RS15615	0.88	-1.4
3,374,762	-				-0.2
3,374,762	-				+1.1
3,374,771	+				+2.4
3,374,811	-				-0.1
3,374,924	+				+1.1
3,374,924	+				-0.0
3,374,925	-				+1.0
3,375,010	+		RR42_RS15620	0.13	+2.0
3,375,010	+		RR42_RS15620	0.13	+1.1
3,375,012	+		RR42_RS15620	0.16	+0.6
3,375,012	+		RR42_RS15620	0.16	+1.2
3,375,012	+		RR42_RS15620	0.16	-1.2
3,375,022	+		RR42_RS15620	0.29	+0.5
3,375,040	+		RR42_RS15620	0.53	+1.8
3,375,041	-		RR42_RS15620	0.55	-0.5
3,375,339	+		RR42_RS15625	0.25	+0.1
3,375,744	+		RR42_RS15625	0.77	+0.2
3,375,744	+		RR42_RS15625	0.77	-0.8
3,375,744	+		RR42_RS15625	0.77	+1.8
3,375,744	+		RR42_RS15625	0.77	+0.2
3,375,745	-		RR42_RS15625	0.77	-0.5
3,375,745	-		RR42_RS15625	0.77	-1.1
3,375,745	-		RR42_RS15625	0.77	+1.4
3,376,005	-				-0.0
3,376,007	+				-0.9
3,376,007	+				+1.0
3,376,007	+				+0.2
3,376,053	+				-0.3
3,376,053	+				-0.8
3,376,054	-				+0.1
3,376,054	-				+0.8
3,376,054	-				+0.4