Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15405

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,329,949	+		RR42_RS15400	0.31	-0.4
3,329,950	-		RR42_RS15400	0.31	+1.6
3,329,950	-		RR42_RS15400	0.31	-1.2
3,330,064	-		RR42_RS15400	0.41	+1.0
3,330,702	+				+0.0
3,330,702	+				+0.6
3,330,702	+				-0.5
3,330,702	+				+0.7
3,330,702	+				-1.4
3,330,702	+				-0.9
3,330,703	-				-0.8
3,330,703	-				+1.2
3,330,703	-				-0.0
3,330,703	-				-1.1
3,330,772	-				+0.2
3,330,772	-				+0.6
3,330,882	+				-0.1
3,330,883	-				-0.6
3,330,883	-				-0.4
3,330,934	+				-1.5
3,330,934	+				-0.1
3,330,934	+				-0.4
3,330,934	+				-1.9
3,330,935	-				-0.7
3,330,935	-				+0.9
3,330,935	-				-0.3
3,330,935	-				-0.2
3,330,982	+				+0.3
3,330,982	+				-0.6
3,330,982	+				-0.4
3,331,005	+		RR42_RS15405	0.11	-0.1
3,331,006	-		RR42_RS15405	0.11	+0.5
3,331,006	-		RR42_RS15405	0.11	-1.1
3,331,006	-		RR42_RS15405	0.11	+0.8
3,331,082	+		RR42_RS15405	0.23	-0.0
3,331,082	+		RR42_RS15405	0.23	+0.1
3,331,083	-		RR42_RS15405	0.23	-1.0
3,331,177	+		RR42_RS15405	0.38	-0.2
3,331,249	+		RR42_RS15405	0.49	+0.0
3,331,250	-		RR42_RS15405	0.50	-1.6
3,331,250	-		RR42_RS15405	0.50	-1.0
3,331,250	-		RR42_RS15405	0.50	-2.1
3,331,323	-		RR42_RS15405	0.61	-2.1
3,331,563	+				-0.0
3,331,563	+				-0.1
3,331,564	-				-0.5
3,331,564	-				-0.4
3,331,596	-				-1.7
3,331,596	-				-0.1
3,331,611	+				+0.2
3,331,612	-				-1.5
3,331,640	+				+0.1
3,331,642	+				-1.1
3,331,651	+				-0.5
3,331,669	+				+0.4
3,331,669	+				+0.9
3,331,672	+				-0.1
3,331,760	+				-0.9
3,331,765	+				+1.1
3,331,766	-				-1.6
3,331,768	+				-0.3
3,331,768	+				+0.6
3,331,898	+		RR42_RS15410	0.16	+0.1
3,332,046	+		RR42_RS15410	0.70	-0.8
3,332,046	+		RR42_RS15410	0.70	-0.8
3,332,047	-		RR42_RS15410	0.70	-1.6
3,332,111	-				+0.4
3,332,111	-				-0.6
3,332,127	+				-1.9
3,332,329	+				-1.7
3,332,330	-				-1.4
3,332,561	+		RR42_RS15415	0.69	-0.3
3,332,562	-		RR42_RS15415	0.69	-1.8
3,332,562	-		RR42_RS15415	0.69	-0.2