Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15325

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,314,659	+				+0.4
3,314,663	-				-0.0
3,314,768	-				-0.6
3,314,769	+				+0.7
3,315,614	+				-0.4
3,315,615	-				-0.2
3,315,615	-				+0.4
3,315,743	+				+0.4
3,315,743	+				-0.3
3,315,865	+		RR42_RS15325	0.17	-0.1
3,315,865	+		RR42_RS15325	0.17	-0.7
3,315,866	-		RR42_RS15325	0.17	+0.8
3,315,866	-		RR42_RS15325	0.17	-0.9
3,316,024	+		RR42_RS15325	0.30	+1.2
3,316,025	-		RR42_RS15325	0.30	-1.3
3,316,030	+		RR42_RS15325	0.30	+0.5
3,316,030	+		RR42_RS15325	0.30	+0.4
3,316,030	+		RR42_RS15325	0.30	+0.4
3,316,031	-		RR42_RS15325	0.30	-0.4
3,316,037	+		RR42_RS15325	0.31	-0.2
3,316,051	+		RR42_RS15325	0.32	+0.7
3,316,081	+		RR42_RS15325	0.35	+0.1
3,316,081	+		RR42_RS15325	0.35	+0.2
3,316,082	-		RR42_RS15325	0.35	+0.6
3,316,556	+		RR42_RS15325	0.73	-0.1
3,316,655	-		RR42_RS15325	0.81	+2.6
3,316,704	+		RR42_RS15325	0.85	-0.3
3,316,704	+		RR42_RS15325	0.85	+0.8
3,316,705	-		RR42_RS15325	0.85	+0.3
3,316,736	-		RR42_RS15325	0.88	-0.3
3,316,801	+				-1.5
3,316,802	-				-1.2
3,316,863	+				-2.3
3,316,863	+				-0.6
3,316,867	+				-0.1
3,316,867	+				-0.5
3,316,868	-				-0.6
3,316,868	-				-1.0
3,317,133	+		RR42_RS15330	0.22	-0.2
3,317,133	+		RR42_RS15330	0.22	-0.2
3,317,134	-		RR42_RS15330	0.22	+0.2
3,317,146	-		RR42_RS15330	0.23	-1.1
3,317,265	+		RR42_RS15330	0.34	-0.9
3,317,265	+		RR42_RS15330	0.34	-0.5
3,317,266	-		RR42_RS15330	0.34	+1.1
3,317,574	+		RR42_RS15330	0.62	-0.3
3,317,575	-		RR42_RS15330	0.63	-0.1
3,317,582	-		RR42_RS15330	0.63	+1.1
3,317,618	+		RR42_RS15330	0.66	+0.7
3,317,618	+		RR42_RS15330	0.66	+0.1
3,317,619	-		RR42_RS15330	0.67	-0.9
3,317,772	+		RR42_RS15330	0.81	+0.3
3,317,793	+		RR42_RS15330	0.83	+0.3