Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15130

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,272,661	-				-0.3
3,272,833	+		RR42_RS15125	0.26	+2.1
3,272,834	-		RR42_RS15125	0.26	+0.9
3,272,834	-		RR42_RS15125	0.26	-1.4
3,272,834	-		RR42_RS15125	0.26	+0.2
3,272,956	+		RR42_RS15125	0.42	-0.7
3,272,956	+		RR42_RS15125	0.42	+1.2
3,272,957	-		RR42_RS15125	0.42	+0.5
3,272,965	+				+0.8
3,272,980	+		RR42_RS15125	0.45	+0.8
3,273,054	-		RR42_RS15125	0.54	-0.5
3,273,122	+		RR42_RS15125	0.63	-0.5
3,273,266	+		RR42_RS15125	0.82	+0.7
3,273,266	+		RR42_RS15125	0.82	+0.7
3,273,266	+		RR42_RS15125	0.82	-0.8
3,273,266	+		RR42_RS15125	0.82	+0.1
3,273,266	+		RR42_RS15125	0.82	-1.2
3,273,267	-		RR42_RS15125	0.82	+1.3
3,273,274	+		RR42_RS15125	0.83	+0.7
3,273,274	+		RR42_RS15125	0.83	-1.7
3,273,274	+		RR42_RS15125	0.83	-1.6
3,273,274	+		RR42_RS15125	0.83	+0.7
3,273,275	-		RR42_RS15125	0.83	+0.3
3,273,275	-		RR42_RS15125	0.83	+0.6
3,273,480	-				+0.1
3,273,485	-				+0.7
3,273,485	-				-0.7
3,273,540	+				-1.1
3,273,541	-				+1.4
3,273,687	+		RR42_RS15130	0.12	-0.2
3,273,688	-		RR42_RS15130	0.12	-1.3
3,273,867	+		RR42_RS15130	0.27	+0.6
3,273,867	+		RR42_RS15130	0.27	-1.5
3,273,868	-		RR42_RS15130	0.27	-0.2
3,273,868	-		RR42_RS15130	0.27	-1.7
3,273,868	-		RR42_RS15130	0.27	-1.9
3,273,868	-		RR42_RS15130	0.27	-0.5
3,273,871	+		RR42_RS15130	0.27	+2.4
3,273,871	+		RR42_RS15130	0.27	-0.3
3,273,871	+		RR42_RS15130	0.27	-0.6
3,273,871	+		RR42_RS15130	0.27	-1.1
3,273,871	+		RR42_RS15130	0.27	-0.5
3,274,534	-		RR42_RS15130	0.82	-0.1
3,274,542	+		RR42_RS15130	0.83	-1.9
3,274,543	-		RR42_RS15130	0.83	+0.7
3,274,552	+		RR42_RS15130	0.84	+0.1
3,274,553	-		RR42_RS15130	0.84	-1.0
3,274,751	-				+0.1
3,274,761	+				-0.3
3,274,761	+				-0.4
3,274,761	+				-0.3
3,274,762	-				+1.2
3,275,071	+		RR42_RS15135	0.23	+0.0
3,275,524	+		RR42_RS15135	0.74	+3.7
3,275,525	-		RR42_RS15135	0.74	+0.8
3,275,686	-				-1.5