Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14705

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,168,660	+				+2.3
3,168,660	+				+1.0
3,168,661	-				+0.3
3,168,661	-				+1.3
3,168,661	-				+0.1
3,168,662	+				+0.9
3,168,663	-				-0.3
3,168,663	-				-0.1
3,168,663	-				+0.0
3,168,663	-				-0.0
3,168,663	-				-1.8
3,168,802	-		RR42_RS14700	0.31	+0.9
3,168,802	-		RR42_RS14700	0.31	-0.9
3,168,822	+		RR42_RS14700	0.35	+0.8
3,169,032	-		RR42_RS14700	0.80	-1.3
3,169,276	+				+1.6
3,169,276	+				-0.7
3,169,277	-				-0.3
3,169,277	-				-0.4
3,169,369	+				+0.5
3,169,369	+				+0.3
3,169,370	-				+0.1
3,169,370	-				+0.3
3,169,370	-				-1.7
3,169,452	+				-0.0
3,169,452	+				-0.2
3,169,452	+				+0.1
3,169,452	+				+0.5
3,169,453	-				+1.3
3,169,453	-				-0.6
3,169,453	-				+0.2
3,169,453	-				+0.5
3,169,456	+				+0.5
3,169,456	+				-0.4
3,169,456	+				+0.3
3,169,456	+				-1.2
3,169,457	-				-0.6
3,169,457	-				-0.4
3,169,457	-				+1.6
3,169,457	-				+0.2
3,169,457	-				+0.7
3,169,459	+				+0.0
3,169,560	+		RR42_RS14705	0.35	+0.3
3,169,560	+		RR42_RS14705	0.35	+1.0
3,169,609	+		RR42_RS14705	0.50	-0.4
3,169,609	+		RR42_RS14705	0.50	-0.3
3,169,610	-		RR42_RS14705	0.50	+0.1
3,169,725	-		RR42_RS14705	0.85	+0.3
3,169,725	-		RR42_RS14705	0.85	-1.5
3,169,933	-				+1.9
3,169,992	-				-0.4
3,169,994	-				-0.3
3,169,994	-				-0.1
3,170,176	+		RR42_RS14715	0.36	-0.9
3,170,176	+		RR42_RS14715	0.36	-0.7
3,170,182	+		RR42_RS14715	0.37	+0.2
3,170,182	+		RR42_RS14715	0.37	+0.3
3,170,183	-		RR42_RS14715	0.38	-0.4
3,170,183	-		RR42_RS14715	0.38	-0.1
3,170,272	+		RR42_RS14715	0.60	-0.5
3,170,272	+		RR42_RS14715	0.60	+0.5
3,170,302	+		RR42_RS14715	0.68	-1.2
3,170,303	-		RR42_RS14715	0.68	+0.3
3,170,397	+				-2.6
3,170,398	-				+2.6
3,170,429	+				-2.0
3,170,429	+				-0.2
3,170,430	-				+1.3
3,170,430	-				-0.0
3,170,469	+				-0.2
3,170,496	-				+1.6
3,170,519	+				+0.2
3,170,519	+				-0.2
3,170,519	+				+0.3
3,170,519	+				-0.1
3,170,520	-				+0.5
3,170,520	-				-0.3
3,170,520	-				-0.0
3,170,520	-				-0.5
3,170,520	-				+0.7
3,170,655	-				+1.1
3,170,772	-				-0.2