Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13480

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS13475 and RR42_RS13480 are separated by 88 nucleotidesRR42_RS13480 and RR42_RS13485 are separated by 194 nucleotides RR42_RS13475: RR42_RS13475 - phosphoglucosamine mutase, at 2,907,275 to 2,908,621 _RS13475 RR42_RS13480: RR42_RS13480 - dihydropteroate synthase, at 2,908,710 to 2,909,573 _RS13480 RR42_RS13485: RR42_RS13485 - cell division protein FtsH, at 2,909,768 to 2,911,651 _RS13485 Position (kb) 2908 2909 2910Strain fitness (log2 ratio) -1 0 1at 2908.672 kb on - strandat 2909.586 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with Paraquat dichloride 0.064 mg/ml
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2,908,672 - -0.9
2,909,586 - +1.2

Or see this region's nucleotide sequence