Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13050

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,810,417	+				+0.1
2,810,418	-				-1.0
2,810,418	-				-2.1
2,810,418	-				-1.1
2,811,261	-				+0.1
2,811,308	+				+2.2
2,811,309	+				-0.1
2,811,309	+				+3.2
2,811,310	-				-0.6
2,811,310	-				+0.4
2,811,382	+				+0.2
2,811,382	+				-2.0
2,811,383	-				+1.0
2,811,476	+				+0.6
2,811,477	-				+0.4
2,811,539	+		RR42_RS13050	0.15	-0.3
2,811,540	-		RR42_RS13050	0.15	-0.6
2,811,728	+		RR42_RS13050	0.35	-0.5
2,811,728	+		RR42_RS13050	0.35	+1.0
2,811,728	+		RR42_RS13050	0.35	+0.7
2,811,728	+		RR42_RS13050	0.35	-1.9
2,811,729	-		RR42_RS13050	0.35	-0.2
2,811,729	-		RR42_RS13050	0.35	+1.0
2,811,835	+		RR42_RS13050	0.46	+0.2
2,811,835	+		RR42_RS13050	0.46	-0.6
2,811,835	+		RR42_RS13050	0.46	+2.2
2,811,835	+		RR42_RS13050	0.46	+0.2
2,811,835	+		RR42_RS13050	0.46	-0.4
2,811,836	-		RR42_RS13050	0.46	-0.2
2,812,013	+		RR42_RS13050	0.65	-2.1
2,812,014	-		RR42_RS13050	0.65	+0.4
2,812,014	-		RR42_RS13050	0.65	+1.4
2,812,014	-		RR42_RS13050	0.65	-1.3
2,812,014	-		RR42_RS13050	0.65	+1.4
2,812,019	+		RR42_RS13050	0.66	-0.8
2,812,020	-		RR42_RS13050	0.66	-1.0
2,812,202	-		RR42_RS13050	0.85	+0.4
2,812,331	-				+0.4
2,812,889	+		RR42_RS13055	0.66	-0.2
2,812,940	-		RR42_RS13055	0.73	+0.6
2,812,940	-		RR42_RS13055	0.73	-0.1
2,812,940	-		RR42_RS13055	0.73	-1.0
2,812,973	-		RR42_RS13055	0.77	-2.9
2,813,090	+				-0.1
2,813,090	+				-1.7
2,813,090	+				+1.2
2,813,091	-				-0.4
2,813,091	-				+1.2
2,813,091	-				+0.0
2,813,091	-				+1.2
2,813,091	-				+0.2
2,813,091	-				-0.1
2,813,146	+				+0.3
2,813,147	-				-1.9
2,813,208	+				+2.2
2,813,209	-				+0.7
2,813,209	-				+0.4