Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12615

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,708,152	+		RR42_RS12610	0.33	-0.2
2,708,152	+		RR42_RS12610	0.33	-0.2
2,708,152	+		RR42_RS12610	0.33	+0.2
2,708,543	+		RR42_RS12610	0.73	-1.3
2,708,544	-		RR42_RS12610	0.73	-1.2
2,708,633	+		RR42_RS12610	0.82	+1.6
2,708,634	-		RR42_RS12610	0.82	-0.8
2,708,634	-		RR42_RS12610	0.82	-0.6
2,708,637	+		RR42_RS12610	0.82	-0.2
2,708,637	+		RR42_RS12610	0.82	+1.5
2,708,638	-		RR42_RS12610	0.82	+0.5
2,708,638	-		RR42_RS12610	0.82	-1.2
2,708,638	-		RR42_RS12610	0.82	+0.9
2,708,745	-				+0.5
2,708,745	-				-1.3
2,708,890	-				+0.7
2,708,890	-				+1.0
2,709,386	+		RR42_RS12615	0.52	+0.2
2,709,386	+		RR42_RS12615	0.52	+1.2
2,709,766	-				-0.2
2,709,778	+				+1.2
2,709,779	-				-1.7
2,709,804	+				-1.4
2,709,804	+				-0.3
2,709,805	-				-0.2
2,709,805	-				+2.2
2,709,887	+				+0.7
2,709,888	-				+1.2
2,709,931	+				-2.0
2,710,185	+				-0.0
2,710,229	+				-0.5
2,710,229	+				-1.2
2,710,230	-				+1.3
2,710,230	-				+0.2
2,710,240	+				+0.2
2,710,240	+				+0.0
2,710,257	+				+0.6
2,710,258	-				-0.5
2,710,375	+				-0.3
2,710,376	-				-0.6
2,710,441	+				+0.6
2,710,444	+				-0.4
2,710,445	-				+0.2
2,710,445	-				+0.7
2,710,445	-				-0.7
2,710,461	-				-1.7
2,710,486	+				+0.7
2,710,536	+		RR42_RS12625	0.11	-0.4
2,710,536	+		RR42_RS12625	0.11	+0.3
2,710,536	+		RR42_RS12625	0.11	-0.3
2,710,536	+		RR42_RS12625	0.11	+0.6
2,710,537	-		RR42_RS12625	0.11	+0.4
2,710,537	-		RR42_RS12625	0.11	-0.3
2,710,581	-		RR42_RS12625	0.20	+0.2
2,710,588	+		RR42_RS12625	0.21	-1.0
2,710,588	+		RR42_RS12625	0.21	-0.4
2,710,588	+		RR42_RS12625	0.21	+0.2
2,710,588	+		RR42_RS12625	0.21	+0.0
2,710,589	-		RR42_RS12625	0.21	+0.2
2,710,597	-		RR42_RS12625	0.23	+0.2
2,710,597	-		RR42_RS12625	0.23	+1.0
2,710,666	-		RR42_RS12625	0.36	-1.1