Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12375

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,654,150	+		RR42_RS12370	0.12	-0.9
2,654,150	+		RR42_RS12370	0.12	+0.1
2,654,163	-		RR42_RS12370	0.13	+0.8
2,654,163	-		RR42_RS12370	0.13	+0.3
2,654,319	-		RR42_RS12370	0.34	-0.5
2,654,322	-		RR42_RS12370	0.34	-1.8
2,654,726	-		RR42_RS12370	0.87	-0.6
2,654,784	+				-0.7
2,654,807	+				-0.2
2,654,807	+				+1.1
2,654,807	+				+0.6
2,654,807	+				+0.7
2,654,807	+				-0.7
2,654,807	+				-0.2
2,654,808	-				+0.6
2,654,808	-				-1.2
2,655,038	+				-0.2
2,655,039	-				+0.2
2,655,068	+				+1.6
2,655,722	+		RR42_RS12375	0.66	+0.6
2,655,722	+		RR42_RS12375	0.66	-0.7
2,655,723	-		RR42_RS12375	0.66	-0.1
2,655,723	-		RR42_RS12375	0.66	+1.3
2,655,881	+		RR42_RS12375	0.83	+0.8
2,656,074	+				+0.0
2,656,074	+				-1.9
2,656,075	-				-0.1
2,656,075	-				-0.1
2,656,380	+				-1.9
2,656,381	-				-1.0
2,656,386	+				-1.9
2,656,386	+				+0.8
2,656,386	+				-0.2
2,656,386	+				-0.3
2,656,387	-				-0.5
2,656,664	+		RR42_RS12385	0.12	+1.6
2,656,665	-		RR42_RS12385	0.12	+0.1
2,656,665	-		RR42_RS12385	0.12	-0.7
2,656,665	-		RR42_RS12385	0.12	-3.0
2,656,699	+		RR42_RS12385	0.15	-0.1
2,656,736	-		RR42_RS12385	0.18	+0.5
2,656,786	+		RR42_RS12385	0.22	+0.2
2,656,786	+		RR42_RS12385	0.22	+0.2
2,656,786	+		RR42_RS12385	0.22	-1.4
2,656,786	+		RR42_RS12385	0.22	+1.2
2,656,787	-		RR42_RS12385	0.22	+0.3
2,656,787	-		RR42_RS12385	0.22	+1.1
2,656,835	-		RR42_RS12385	0.26	+0.9
2,656,835	-		RR42_RS12385	0.26	-0.6
2,656,843	+		RR42_RS12385	0.27	-0.0
2,656,967	+		RR42_RS12385	0.37	-0.3
2,656,968	-		RR42_RS12385	0.37	-0.8
2,656,968	-		RR42_RS12385	0.37	-1.1
2,657,029	+		RR42_RS12385	0.42	-0.4
2,657,029	+		RR42_RS12385	0.42	-0.5
2,657,029	+		RR42_RS12385	0.42	+0.1
2,657,029	+		RR42_RS12385	0.42	+0.7
2,657,030	-		RR42_RS12385	0.42	+0.5
2,657,030	-		RR42_RS12385	0.42	-1.8