Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12315

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,643,339	+				+0.6
2,643,361	-		RR42_RS12310	0.13	-0.2
2,643,390	+		RR42_RS12310	0.17	-0.5
2,643,477	+		RR42_RS12310	0.30	+2.1
2,643,478	-		RR42_RS12310	0.30	-0.2
2,643,523	+		RR42_RS12310	0.37	-0.2
2,643,670	+		RR42_RS12310	0.59	+0.7
2,643,670	+		RR42_RS12310	0.59	-0.1
2,643,700	-		RR42_RS12310	0.63	-1.8
2,643,731	+		RR42_RS12310	0.68	+1.5
2,643,953	+				+0.2
2,643,971	+				-0.3
2,643,972	-				-0.2
2,643,972	-				-0.6
2,643,972	-				+0.5
2,644,052	+				+0.5
2,644,426	+		RR42_RS12315	0.35	-0.7
2,644,427	-		RR42_RS12315	0.36	-2.1
2,645,241	-				-0.3
2,645,332	-				-0.2
2,645,478	+				-1.6
2,645,478	+				+0.5
2,645,479	-				+0.3
2,645,479	-				-0.8
2,645,490	-				+1.5
2,645,572	+		RR42_RS12325	0.11	+1.1
2,645,680	+		RR42_RS12325	0.28	-0.0
2,645,680	+		RR42_RS12325	0.28	-0.1
2,645,681	-		RR42_RS12325	0.28	-0.3
2,645,681	-		RR42_RS12325	0.28	-1.6
2,645,740	+		RR42_RS12325	0.37	-0.1
2,645,756	-		RR42_RS12325	0.39	-0.2
2,645,908	+		RR42_RS12325	0.63	+0.1