Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12250

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,631,735	+		RR42_RS12245	0.11	-0.5
2,631,841	-		RR42_RS12245	0.22	-0.5
2,631,998	-		RR42_RS12245	0.38	+1.2
2,632,090	+		RR42_RS12245	0.48	+1.5
2,632,090	+		RR42_RS12245	0.48	+0.9
2,632,091	-		RR42_RS12245	0.48	+1.5
2,632,092	+		RR42_RS12245	0.48	+0.3
2,632,092	+		RR42_RS12245	0.48	-0.3
2,632,165	+		RR42_RS12245	0.56	-1.2
2,632,228	-		RR42_RS12245	0.63	-0.5
2,632,266	+		RR42_RS12245	0.67	-1.4
2,632,266	+		RR42_RS12245	0.67	-0.9
2,632,429	-		RR42_RS12245	0.84	-0.1
2,632,501	+				+0.6
2,632,501	+				-0.2
2,632,501	+				-0.2
2,632,502	-				+0.1
2,632,503	+				-0.6
2,632,503	+				+1.4
2,632,503	+				-0.1
2,632,503	+				+0.1
2,632,504	-				+1.1
2,632,868	+		RR42_RS12250	0.26	+0.3
2,632,868	+		RR42_RS12250	0.26	-0.2
2,632,933	-		RR42_RS12250	0.31	-1.2
2,633,030	+		RR42_RS12250	0.40	+0.5
2,633,031	-		RR42_RS12250	0.40	+0.5
2,633,785	+				-0.5
2,633,869	+		RR42_RS12255	0.18	+0.8
2,633,869	+		RR42_RS12255	0.18	+0.8
2,633,992	+		RR42_RS12255	0.31	-0.8
2,633,992	+		RR42_RS12255	0.31	+0.3
2,634,244	+		RR42_RS12255	0.58	-0.5
2,634,244	+		RR42_RS12255	0.58	+0.5
2,634,244	+		RR42_RS12255	0.58	+1.7
2,634,244	+		RR42_RS12255	0.58	+1.8
2,634,244	+		RR42_RS12255	0.58	-0.7
2,634,244	+		RR42_RS12255	0.58	+1.6
2,634,244	+		RR42_RS12255	0.58	-1.3
2,634,245	-		RR42_RS12255	0.58	-0.7
2,634,245	-		RR42_RS12255	0.58	+0.3
2,634,449	-		RR42_RS12255	0.80	-0.9
2,634,449	-		RR42_RS12255	0.80	+2.1
2,634,478	+		RR42_RS12255	0.83	+0.1
2,634,479	-		RR42_RS12255	0.83	-0.5
2,634,479	-		RR42_RS12255	0.83	+1.9
2,634,548	-				+0.6
2,634,548	-				+1.4