Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12205

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,624,567	+		RR42_RS12200	0.76	-0.6
2,624,618	+		RR42_RS12200	0.80	+1.0
2,624,618	+		RR42_RS12200	0.80	+0.1
2,624,618	+		RR42_RS12200	0.80	+0.4
2,624,618	+		RR42_RS12200	0.80	+0.1
2,624,618	+		RR42_RS12200	0.80	+1.1
2,624,619	-		RR42_RS12200	0.80	-0.0
2,624,619	-		RR42_RS12200	0.80	+2.1
2,624,619	-		RR42_RS12200	0.80	+1.1
2,624,796	-				-0.4
2,624,796	-				+0.3
2,624,796	-				+0.0
2,624,892	+				-1.7
2,624,914	-				-0.8
2,625,432	+		RR42_RS12205	0.21	-0.5
2,625,511	+		RR42_RS12205	0.29	-1.4
2,625,511	+		RR42_RS12205	0.29	-1.1
2,625,512	-		RR42_RS12205	0.30	+0.1
2,625,512	-		RR42_RS12205	0.30	+1.1
2,625,639	-		RR42_RS12205	0.43	-1.2
2,625,667	+		RR42_RS12205	0.46	+0.6
2,625,668	-		RR42_RS12205	0.46	-0.3
2,625,668	-		RR42_RS12205	0.46	+1.5
2,625,669	+		RR42_RS12205	0.46	+2.1
2,625,669	+		RR42_RS12205	0.46	+1.1
2,625,669	+		RR42_RS12205	0.46	-0.1
2,625,669	+		RR42_RS12205	0.46	-0.1
2,625,669	+		RR42_RS12205	0.46	+0.9
2,625,669	+		RR42_RS12205	0.46	-0.1
2,625,669	+		RR42_RS12205	0.46	-0.6
2,625,670	-		RR42_RS12205	0.46	-0.2
2,625,670	-		RR42_RS12205	0.46	-1.0
2,625,670	-		RR42_RS12205	0.46	-0.7
2,625,670	-		RR42_RS12205	0.46	-1.1
2,625,670	-		RR42_RS12205	0.46	+0.4
2,625,670	-		RR42_RS12205	0.46	+0.4
2,625,670	-		RR42_RS12205	0.46	-1.0
2,625,670	-		RR42_RS12205	0.46	-0.4
2,625,675	+		RR42_RS12205	0.47	+0.5
2,625,675	+		RR42_RS12205	0.47	-1.2
2,625,675	+		RR42_RS12205	0.47	-1.2
2,625,676	-		RR42_RS12205	0.47	-0.0
2,625,676	-		RR42_RS12205	0.47	+0.2
2,625,787	+		RR42_RS12205	0.58	+0.5
2,625,787	+		RR42_RS12205	0.58	-0.7
2,625,787	+		RR42_RS12205	0.58	+0.1
2,625,788	-		RR42_RS12205	0.58	-0.9
2,625,788	-		RR42_RS12205	0.58	-0.3
2,625,788	-		RR42_RS12205	0.58	-2.1
2,625,788	-		RR42_RS12205	0.58	+1.0
2,625,788	-		RR42_RS12205	0.58	-0.9
2,625,788	-		RR42_RS12205	0.58	-0.6
2,625,789	+		RR42_RS12205	0.58	-0.7
2,625,790	-		RR42_RS12205	0.58	-0.5
2,625,790	-		RR42_RS12205	0.58	+0.5
2,625,790	-		RR42_RS12205	0.58	+0.1
2,625,790	-		RR42_RS12205	0.58	-0.2
2,626,002	+		RR42_RS12205	0.80	-1.0
2,626,002	+		RR42_RS12205	0.80	-0.9
2,626,002	+		RR42_RS12205	0.80	+0.2
2,626,003	-		RR42_RS12205	0.81	-0.5
2,626,005	+		RR42_RS12205	0.81	-0.3
2,626,006	-		RR42_RS12205	0.81	+0.0
2,626,006	-		RR42_RS12205	0.81	+1.1
2,626,215	+				-0.1
2,626,215	+				-1.1
2,626,216	-				+0.5
2,626,458	+		RR42_RS12210	0.46	-0.7
2,626,459	-		RR42_RS12210	0.47	-1.3
2,626,531	+		RR42_RS12210	0.64	-1.6
2,626,531	+		RR42_RS12210	0.64	-1.5
2,626,546	+		RR42_RS12210	0.68	-0.4
2,626,547	-		RR42_RS12210	0.68	-0.4
2,626,547	-		RR42_RS12210	0.68	-0.1
2,626,725	+				-0.1
2,626,725	+				+0.7
2,626,725	+				-1.2
2,626,725	+				-1.2
2,626,725	+				-0.1
2,626,726	-		RR42_RS12215	0.10	-1.0
2,627,094	-		RR42_RS12215	0.84	+0.0
2,627,094	-		RR42_RS12215	0.84	-0.2
2,627,161	+				-1.0
2,627,161	+				+0.1
2,627,161	+				+2.1