Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12195

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,621,754	+				+2.1
2,621,754	+				-0.7
2,621,754	+				-0.7
2,621,754	+				+2.5
2,621,754	+				+0.5
2,621,755	-				+0.2
2,621,755	-				-0.2
2,621,830	-				-1.0
2,621,874	+				-0.1
2,621,874	+				-0.2
2,621,875	-				+3.1
2,621,875	-				+1.1
2,621,875	-				-1.2
2,621,875	-				+1.2
2,622,060	+		RR42_RS12190	0.24	-0.2
2,622,060	+		RR42_RS12190	0.24	+0.3
2,622,061	-		RR42_RS12190	0.24	-2.5
2,622,078	+		RR42_RS12190	0.28	-1.4
2,622,084	+		RR42_RS12190	0.30	+0.8
2,622,085	-		RR42_RS12190	0.30	-0.3
2,622,085	-		RR42_RS12190	0.30	-1.1
2,622,085	-		RR42_RS12190	0.30	-1.4
2,622,157	+		RR42_RS12190	0.46	-0.9
2,622,158	-		RR42_RS12190	0.47	+0.5
2,622,158	-		RR42_RS12190	0.47	-0.1
2,622,159	+		RR42_RS12190	0.47	+0.3
2,622,381	+				+0.2
2,622,381	+				-1.9
2,622,656	+		RR42_RS12195	0.25	-0.1
2,622,656	+		RR42_RS12195	0.25	+0.9
2,622,656	+		RR42_RS12195	0.25	+0.1
2,622,797	+		RR42_RS12195	0.46	-0.6
2,622,797	+		RR42_RS12195	0.46	-1.6
2,622,905	+		RR42_RS12195	0.62	+0.3
2,622,905	+		RR42_RS12195	0.62	-0.1
2,622,906	-		RR42_RS12195	0.62	+0.6
2,622,959	+		RR42_RS12195	0.70	+0.1
2,622,960	-		RR42_RS12195	0.70	-0.5
2,623,031	+		RR42_RS12195	0.81	-0.5
2,623,032	-		RR42_RS12195	0.81	-0.7
2,623,032	-		RR42_RS12195	0.81	-0.4
2,623,359	+				-0.7
2,623,359	+				-1.9
2,623,388	-				-2.0
2,623,396	+				+2.6
2,623,490	+				+0.0
2,623,491	-				+3.1
2,623,686	-				+0.8
2,623,779	+		RR42_RS12200	0.15	+0.8
2,623,779	+		RR42_RS12200	0.15	+0.5
2,623,780	-		RR42_RS12200	0.15	-0.8
2,623,780	-		RR42_RS12200	0.15	-0.6
2,623,780	-		RR42_RS12200	0.15	+0.6
2,623,794	-		RR42_RS12200	0.16	+1.1
2,623,794	-		RR42_RS12200	0.16	-0.1
2,623,799	+		RR42_RS12200	0.17	-0.5
2,623,820	+		RR42_RS12200	0.18	-0.2
2,623,952	+		RR42_RS12200	0.29	+0.8
2,623,953	-		RR42_RS12200	0.29	+1.5
2,623,953	-		RR42_RS12200	0.29	-0.0
2,623,953	-		RR42_RS12200	0.29	-0.3
2,624,063	+		RR42_RS12200	0.37	+0.8
2,624,111	+		RR42_RS12200	0.41	-0.8