Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11890

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,542,595	+		RR42_RS11885	0.65	+0.4
2,542,596	-		RR42_RS11885	0.65	-0.4
2,542,596	-		RR42_RS11885	0.65	+0.9
2,542,610	+		RR42_RS11885	0.65	+3.1
2,542,692	-		RR42_RS11885	0.68	+0.4
2,542,892	+		RR42_RS11885	0.76	-2.0
2,542,892	+		RR42_RS11885	0.76	-1.2
2,542,893	-		RR42_RS11885	0.76	+0.5
2,542,893	-		RR42_RS11885	0.76	+0.5
2,542,970	+		RR42_RS11885	0.79	+1.1
2,542,970	+		RR42_RS11885	0.79	+0.9
2,542,971	-		RR42_RS11885	0.79	-1.1
2,543,073	-		RR42_RS11885	0.83	-0.3
2,543,083	+		RR42_RS11885	0.84	+0.9
2,543,133	-		RR42_RS11885	0.86	+1.1
2,543,291	+				+0.2
2,543,292	-				-1.5
2,543,350	-				+0.4
2,543,452	+				+0.5
2,543,466	+				+0.2
2,543,467	-				+0.1
2,543,467	-				+1.4
2,543,505	-				+1.4
2,543,522	+				-0.2
2,543,522	+				+0.5
2,543,523	-				+0.0
2,543,523	-				+0.8
2,543,523	-				-0.4
2,543,523	-				+0.1
2,543,530	-				-0.7
2,543,530	-				-1.0
2,543,530	-				+0.8
2,543,530	-				-0.1
2,544,601	-		RR42_RS11890	0.56	+1.1
2,544,609	+		RR42_RS11890	0.57	-1.0
2,544,609	+		RR42_RS11890	0.57	-0.1
2,544,874	+		RR42_RS11890	0.71	-0.5
2,544,874	+		RR42_RS11890	0.71	-1.7
2,544,875	-		RR42_RS11890	0.71	-0.9
2,544,875	-		RR42_RS11890	0.71	+0.1
2,544,875	-		RR42_RS11890	0.71	-0.4
2,544,875	-		RR42_RS11890	0.71	-1.6
2,544,875	-		RR42_RS11890	0.71	-0.1
2,544,901	+		RR42_RS11890	0.72	-0.3
2,544,902	-		RR42_RS11890	0.72	+0.7
2,545,102	+		RR42_RS11890	0.83	-0.2
2,545,102	+		RR42_RS11890	0.83	+0.6
2,545,102	+		RR42_RS11890	0.83	+3.1
2,545,103	-		RR42_RS11890	0.83	-1.4
2,545,103	-		RR42_RS11890	0.83	-1.9
2,545,103	-		RR42_RS11890	0.83	+1.1
2,545,908	-		RR42_RS11895	0.26	-1.1
2,545,908	-		RR42_RS11895	0.26	-1.0
2,545,929	-		RR42_RS11895	0.28	-1.1
2,545,968	-		RR42_RS11895	0.31	+0.4
2,545,998	-		RR42_RS11895	0.34	-1.1
2,546,001	+		RR42_RS11895	0.34	-0.1
2,546,001	+		RR42_RS11895	0.34	-0.7
2,546,001	+		RR42_RS11895	0.34	+0.8
2,546,001	+		RR42_RS11895	0.34	+0.0
2,546,006	+		RR42_RS11895	0.35	+0.6
2,546,007	-		RR42_RS11895	0.35	-0.6
2,546,072	+		RR42_RS11895	0.40	-0.2
2,546,078	+		RR42_RS11895	0.41	-0.4
2,546,078	+		RR42_RS11895	0.41	+1.5
2,546,079	-		RR42_RS11895	0.41	-0.0
2,546,079	-		RR42_RS11895	0.41	+0.8
2,546,079	-		RR42_RS11895	0.41	+0.4
2,546,103	-		RR42_RS11895	0.43	+0.5
2,546,159	+		RR42_RS11895	0.48	-1.2
2,546,159	+		RR42_RS11895	0.48	-0.8
2,546,159	+		RR42_RS11895	0.48	-0.4
2,546,160	-		RR42_RS11895	0.48	-0.7
2,546,160	-		RR42_RS11895	0.48	-1.0